HHsearch alignment for GI: 254781149 and conserved domain: PRK10463
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional.
Probab=91.91 E-value=0.67 Score=26.51 Aligned_cols=87 Identities=16% Similarity=0.162 Sum_probs=62.0
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 88706874148899999999963022323641167534899999999630223234785550178899899999999999
Q gi|254781149|r 145 ILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICE 224 (266)
Q Consensus 145 iviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~ 224 (266)
T Consensus 107 lNl~sSPGSGKTtLLe~ti~~L~-~~~~~aVIeGD~~T~~DA~RI~~-------~Gv~avQInTG~~CHLDA~MV~~al~ 178 (290)
T PRK10463 107 LNLVSSPGSGKTTLLTETLMRLK-DSVPCAVIEGDQQTVNDAARIRA-------TGTPAIQVNTGKGCHLDAQMIADAAP 178 (290)
T ss_pred EEECCCCCCCHHHHHHHHHHHHH-CCCCEEEEEECCCCHHHHHHHHH-------CCCCEEEECCCCCCCCCHHHHHHHHH
T ss_conf 99306998788999999999873-36757999604235667999997-------69958995479976759999999998
Q ss_pred HHHHCC---CEEECCCCC
Q ss_conf 997299---547479988
Q gi|254781149|r 225 KLQDFP---LIIDDRPSP 239 (266)
Q Consensus 225 ~l~~~p---l~IdD~~~~ 239 (266)
T Consensus 179 ~l~l~~~dllfIENVGNL 196 (290)
T PRK10463 179 RLPLDDNGILFIENVGNL 196 (290)
T ss_pred HCCCCCCCEEEEECCCCC
T ss_conf 489877989998127884