HHsearch alignment for GI: 254781149 and conserved domain: PRK11022
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional.
Probab=92.65 E-value=0.93 Score=25.50 Aligned_cols=111 Identities=20% Similarity=0.190 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-----------C----------------CCCE-EEEC---
Q ss_conf 3777776553016836887068741488999999999630-----------2----------------2323-6411---
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAM-----------S----------------GHGV-AFFS--- 177 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~-----------~----------------g~~V-l~fS--- 177 (266)
T Consensus 20 v~Av~~Vsf~i~~GEilgivGeSGsGKSTl~~~ilgll~~~~~~~~g~i~~~g~dl~~~~~~~~~~~~g~~i~~vfQdp~ 99 (327)
T PRK11022 20 FKAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (327)
T ss_pred EEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCEECCCCCHHHHHHHHCCCEEEEECCCH
T ss_conf 99984418798899999999999878999999997488989976542799999997749999999863776699960851
Q ss_pred --C------------------CCCHHHHHHHHHHHHHCCCCCCCCH--HHCC--CCCCCHHHHHHHHHHHHHHHHCCCEE
Q ss_conf --6------------------7534899999999630223234785--5501--78899899999999999997299547
Q gi|254781149|r 178 --L------------------EMDREKLGARALSNLLYPSSSRIPY--LNLI--RGEINQEQYRISQGICEKLQDFPLII 233 (266)
Q Consensus 178 --l------------------EMs~~ql~~R~ls~~t~~~~s~I~~--~~l~--~g~l~~~e~~~i~~a~~~l~~~pl~I 233 (266)
T Consensus 100 ~sLnP~~tv~~~i~e~l~~~~~~~~~~~~~r~~elL~~---vgl~~~~~~l~~yP~eLSGGq~QRV~IArAL~~~P~lLI 176 (327)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQ---VGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLI 176 (327)
T ss_pred HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---HCCCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf 32074555557677788875278889999999999987---158568889742855469999999999999970999999
Q ss_pred ECCCCCCHH
Q ss_conf 479988989
Q gi|254781149|r 234 DDRPSPGIM 242 (266)
Q Consensus 234 dD~~~~ti~ 242 (266)
T Consensus 177 aDEPTsaLD 185 (327)
T PRK11022 177 ADEPTTALD 185 (327)
T ss_pred ECCCCCCCC
T ss_conf 838876579