HHsearch alignment for GI: 254781149 and conserved domain: PRK11247
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional.
Probab=92.30 E-value=1 Score=25.20 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=69.5
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCCC---------------CEEE-----ECCCCCHHH----
Q ss_conf 77777655301683688706874148899999999963-0223---------------2364-----116753489----
Q gi|254781149|r 130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MSGH---------------GVAF-----FSLEMDREK---- 184 (266)
Q Consensus 130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~g~---------------~Vl~-----fSlEMs~~q---- 184 (266)
T Consensus 26 ~~L~dIs~~I~~GEiv~LiG~nGaGKSTLlr~i~Gl~~p~~G~I~~~~~~i~~~~~~i~~vfQ~~~l~~-~~tV~eni~~ 104 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPTAGDLLAGTAPLAEAQEDTRLMFQDARLLP-WKKVIDNVGL 104 (257)
T ss_pred EEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHHHHCEEEEECCCCCCC-CCCHHHHHHH
T ss_conf 898240758879989999989988899999999658988887089898755443110079932564476-7789999863
Q ss_pred -----HHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH-----HHHHHHHHHHHH
Q ss_conf -----9999999630223234785550178899899999999999997299547479988989-----999999999999
Q gi|254781149|r 185 -----LGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM-----EFVHVANGLRNK 254 (266)
Q Consensus 185 -----l~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~-----~ira~aR~~k~k 254 (266)
T Consensus 105 gl~~~~~~~~~e~l~~vgL~~~--~~~~p~~LSGGqkQRvaiAraL~~~P~lLlLDEPtsgLD~~~~~~i~~ll~~L~~e 182 (257)
T PRK11247 105 GLKGQWRDAALQALAAVGLADR--ANEWPAALSGGQKQRVALARALIHRPRLLLLDEPLGALDALTRIEMQDLIESLWQQ 182 (257)
T ss_pred HCCCCHHHHHHHHHHHCCCCHH--HHCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 2141069999999998599135--53694448999999999999984599999980987657999999999999999996
Q ss_pred H
Q ss_conf 4
Q gi|254781149|r 255 H 255 (266)
Q Consensus 255 ~ 255 (266)
T Consensus 183 ~ 183 (257)
T PRK11247 183 H 183 (257)
T ss_pred H
T ss_conf 0