HHsearch alignment for GI: 254781149 and conserved domain: PRK11288

Probab=94.84  E-value=0.22  Score=29.84  Aligned_cols=99  Identities=13%  Similarity=0.070  Sum_probs=57.5

Q ss_pred             HHCCCCEEEEECCCCHHHHHHHHHHHHHH-HH------CCCCE------------EEECC----------CCCH-HHH--
Q ss_conf             30168368870687414889999999996-30------22323------------64116----------7534-899--
Q gi|254781149|r  138 GVQLRELILIGARPSMGKTTFALSTALHM-AM------SGHGV------------AFFSL----------EMDR-EKL--  185 (266)
Q Consensus       138 G~~~g~LiviaaRP~mGKTa~alnia~~~-a~------~g~~V------------l~fSl----------EMs~-~ql--  185 (266)
T Consensus       275 ~v~~GEivgivG~nGsGKSTL~k~L~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~gi~~vp~dr~~~~l~~~~sv~enl~~  354 (501)
T PRK11288        275 AVRRGEIVGFFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPVDIRSPRDAIRAGIMLCPEDRKAEGIIPVASVADNINI  354 (501)
T ss_pred             EEECCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCEECCCCCHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf             87088399975688864879999843874887665999999888779789986177860120000255778829999986


Q ss_pred             ---------------------HHHHHHHHHCCCCCCCCHHHCCC--CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH
Q ss_conf             ---------------------99999963022323478555017--8899899999999999997299547479988989
Q gi|254781149|r  186 ---------------------GARALSNLLYPSSSRIPYLNLIR--GEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM  242 (266)
Q Consensus       186 ---------------------~~R~ls~~t~~~~s~I~~~~l~~--g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~  242 (266)
T Consensus       355 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~------l~~~~~~~~~~~~~LSGGq~QRvaiAraL~~~p~vLilDEPT~GLD  428 (501)
T PRK11288        355 SARRHHLRAGCLINNKWEAENADRFIRS------LNIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGID  428 (501)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHHH------CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf             7654035211001659999999999987------5897654437500289999999999999970999899979877899