HHsearch alignment for GI: 254781149 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=97.14 E-value=0.00063 Score=47.58 Aligned_cols=48 Identities=15% Similarity=0.236 Sum_probs=39.3
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 6836887068741488999999999630223236411675348999999996
Q gi|254781149|r 141 LRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSN 192 (266)
Q Consensus 141 ~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~ 192 (266)
T Consensus 100 ~~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~----~dLv~~L~~a 147 (248)
T PRK12377 100 GCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTV----PDVMSRLHES 147 (248)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEH----HHHHHHHHHH
T ss_conf 88608998999987889999999999987996999889----9999999999