HHsearch alignment for GI: 254781149 and conserved domain: PRK13539

>PRK13539 cytochrome c biogenesis protein CcmA; Provisional.
Probab=93.66  E-value=0.66  Score=26.53  Aligned_cols=113  Identities=14%  Similarity=0.064  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HC------CCC--------EEE------ECCCCCHHHHHHH
Q ss_conf             77777655301683688706874148899999999963-02------232--------364------1167534899999
Q gi|254781149|r  130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MS------GHG--------VAF------FSLEMDREKLGAR  188 (266)
Q Consensus       130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~------g~~--------Vl~------fSlEMs~~ql~~R  188 (266)
T Consensus        16 ~il~~vsf~i~~Gei~~l~G~NGaGKTTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~~~~~~ltv~e~l~~   95 (206)
T PRK13539         16 VVFSGLSFTLAAGEALVLTGPNGSGKTTLLRLLAGLLPPAAGTIKLDGGIQDSPVAEACHYLGHRNAMKPALTVAENLEF   95 (206)
T ss_pred             EEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEECCCCHHHHCEECCCCCCCCCCCCHHHHHHH
T ss_conf             99815078986994999989999989999999958878885189999977666638770451641336778799999999


Q ss_pred             HHHHHHCCCC-------CCCCHH---HCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHH
Q ss_conf             9996302232-------347855---501788998999999999999972995474799889899
Q gi|254781149|r  189 ALSNLLYPSS-------SRIPYL---NLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIME  243 (266)
Q Consensus       189 ~ls~~t~~~~-------s~I~~~---~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~  243 (266)
T Consensus        96 ~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrv~la~al~~~p~vllLDEPtsgLD~  159 (206)
T PRK13539         96 W-AAFLGGEELDIAAALEAVGLAPLAHLPFGYLSAGQKRRVALARLLVSNRPIWLLDEPTAALDS  159 (206)
T ss_pred             H-HHHCCCCHHHHHHHHHHCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH
T ss_conf             9-987599789999999984994464788124999999999999999869898999799777899