HHsearch alignment for GI: 254781149 and conserved domain: PRK13549
>PRK13549 xylose transporter ATP-binding subunit; Provisional.
Probab=95.21 E-value=0.066 Score=33.49 Aligned_cols=123 Identities=18% Similarity=0.154 Sum_probs=65.9
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH--H------HCCCC-------------EEEEC---------CC
Q ss_conf 7777765530168368870687414889999999996--3------02232-------------36411---------67
Q gi|254781149|r 130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHM--A------MSGHG-------------VAFFS---------LE 179 (266)
Q Consensus 130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~--a------~~g~~-------------Vl~fS---------lE 179 (266)
T Consensus 276 ~~l~~vsf~v~~GEi~gi~G~nGsGKsTLl~~L~Gl~~~~~~G~i~~~G~~i~~~~~~~~~~~~i~~v~qdr~~~~l~~~ 355 (513)
T PRK13549 276 KRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIRQGIAMVPEDRKRDGIVPV 355 (513)
T ss_pred EEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 36523357886884899747988658999999838988897439999988768689999997177634510000254667
Q ss_pred CCHHH-HHHHHHHHHHC----------------CCCCCCCHH--HCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCC
Q ss_conf 53489-99999996302----------------232347855--501788998999999999999972995474799889
Q gi|254781149|r 180 MDREK-LGARALSNLLY----------------PSSSRIPYL--NLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPG 240 (266)
Q Consensus 180 Ms~~q-l~~R~ls~~t~----------------~~~s~I~~~--~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~t 240 (266)
T Consensus 356 ~sv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~LSGGq~QRv~iAraL~~~P~iLilDEPT~G 435 (513)
T PRK13549 356 MGVGKNITLAALDRFTGRGRIDDAAELKTILESIQRLKVKTSSPELAIARLSGGNQQKAILAKCLLLNPRILILDEPTRG 435 (513)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 84999998887764322232458999999999998648976664465023999999999999999719989999798668
Q ss_pred HH-----HHHHHHHHHH
Q ss_conf 89-----9999999999
Q gi|254781149|r 241 IM-----EFVHVANGLR 252 (266)
Q Consensus 241 i~-----~ira~aR~~k 252 (266)
T Consensus 436 LD~~~~~~i~~ll~~l~ 452 (513)
T PRK13549 436 IDVGAKYEIYKLINQLV 452 (513)
T ss_pred CCHHHHHHHHHHHHHHH
T ss_conf 99999999999999999