HHsearch alignment for GI: 254781149 and conserved domain: PRK13869

>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=94.25  E-value=0.045  Score=34.65  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=31.2

Q ss_pred             CEEEEE-CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             368870-68741488999999999630223236411675
Q gi|254781149|r  143 ELILIG-ARPSMGKTTFALSTALHMAMSGHGVAFFSLEM  180 (266)
Q Consensus       143 ~Livia-aRP~mGKTa~alnia~~~a~~g~~Vl~fSlEM  180 (266)
T Consensus       122 kVIaVaN~KGGVGKTTtav~LA~~LA~~G~RVLlIDLDP  160 (405)
T PRK13869        122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDP  160 (405)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf             289997888776599999999999997799889996456