HHsearch alignment for GI: 254781149 and conserved domain: PTZ00035
>PTZ00035 Rad51; Provisional.
Probab=98.03 E-value=0.0019 Score=44.26 Aligned_cols=140 Identities=13% Similarity=0.134 Sum_probs=91.9
Q ss_pred CCCCCCHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHC----C--CCEEEECCCCCHHHHHHHHHHH--
Q ss_conf 678511137777765-530168368870687414889999999996302----2--3236411675348999999996--
Q gi|254781149|r 122 NPDIKWGLQSVDHLM-GGVQLRELILIGARPSMGKTTFALSTALHMAMS----G--HGVAFFSLEMDREKLGARALSN-- 192 (266)
Q Consensus 122 ~~Gi~TG~~~LD~~~-gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~----g--~~Vl~fSlEMs~~ql~~R~ls~-- 192 (266)
T Consensus 109 ~~~itTGs~~LD~LLGGGiet~sITEi~Ge~gsGKTQlChqLaV~~QLP~~~GG~~GkvvYIDTEgtFrp--eRi~qIA~ 186 (350)
T PTZ00035 109 LIKFTTGSKQLDRLLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRP--ERIVAIAK 186 (350)
T ss_pred CEEECCCCHHHHHHHCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCH--HHHHHHHH
T ss_conf 6035758578887627894138587897279897899999999990485777798862799968899878--99999998
Q ss_pred HHCCCCCCCCHHHCC--CCCCCHHHHHHHHHHHHHHHHCC--CEEECC----------CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 302232347855501--78899899999999999997299--547479----------9889899999999999994799
Q gi|254781149|r 193 LLYPSSSRIPYLNLI--RGEINQEQYRISQGICEKLQDFP--LIIDDR----------PSPGIMEFVHVANGLRNKHTKM 258 (266)
Q Consensus 193 ~t~~~~s~I~~~~l~--~g~l~~~e~~~i~~a~~~l~~~p--l~IdD~----------~~~ti~~ira~aR~~k~k~~~~ 258 (266)
T Consensus 187 ~~gld~~~v-L~nI~~ara~n~ehq~~ll~~~~~~~~e~~vrLlIVDSitalFR~ef~GRgeLa~RQq~L~~~l~~L~~l 265 (350)
T PTZ00035 187 RYGLHPTDC-LNNIAYAKAYNCDHQTELLIDASAMMADARFALLIVDSATALYRSEYIGRGELATRQSHLCRFLRGLQRI 265 (350)
T ss_pred HCCCCHHHH-HHHEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 709997998-5332232206878899999999998511675899854456676654057014899999999999999999
Q ss_pred HHHHHH
Q ss_conf 986421
Q gi|254781149|r 259 VQLYRL 264 (266)
Q Consensus 259 ~~~~~~ 264 (266)
T Consensus 266 A~~~nv 271 (350)
T PTZ00035 266 ADIYGV 271 (350)
T ss_pred HHHCCC
T ss_conf 998095