HHsearch alignment for GI: 254781149 and conserved domain: TIGR00073
>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.
Probab=90.20 E-value=1.1 Score=25.09 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=63.2
Q ss_pred EECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 70687414889999999996302232364116753489999999963022323478555017889989999999999999
Q gi|254781149|r 147 IGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKL 226 (266)
Q Consensus 147 iaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l 226 (266)
T Consensus 39 fmsspGSGKT~LiEk~~~~~~~-~~K~Avi~GD~~t~~DA~RlR~-------~G~~a~~~nTGk~CHLdA~mv~G~~~~L 110 (225)
T TIGR00073 39 FMSSPGSGKTTLIEKLIERLDD-EVKIAVIEGDVQTKNDADRLRK-------YGVPAIQINTGKECHLDAHMVAGAIHAL 110 (225)
T ss_pred ECCCCCCCHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHHHHH-------CCCEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 0258861158999999998457-8978999755322556999986-------4986886368864440166786587554
Q ss_pred HHCCC
Q ss_conf 72995
Q gi|254781149|r 227 QDFPL 231 (266)
Q Consensus 227 ~~~pl 231 (266)
T Consensus 111 ~~~~l 115 (225)
T TIGR00073 111 KDLPL 115 (225)
T ss_pred HCCCC
T ss_conf 21688