HHsearch alignment for GI: 254781149 and conserved domain: TIGR00073

>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.
Probab=90.20  E-value=1.1  Score=25.09  Aligned_cols=77  Identities=18%  Similarity=0.245  Sum_probs=63.2

Q ss_pred             EECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             70687414889999999996302232364116753489999999963022323478555017889989999999999999
Q gi|254781149|r  147 IGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKL  226 (266)
Q Consensus       147 iaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l  226 (266)
T Consensus        39 fmsspGSGKT~LiEk~~~~~~~-~~K~Avi~GD~~t~~DA~RlR~-------~G~~a~~~nTGk~CHLdA~mv~G~~~~L  110 (225)
T TIGR00073        39 FMSSPGSGKTTLIEKLIERLDD-EVKIAVIEGDVQTKNDADRLRK-------YGVPAIQINTGKECHLDAHMVAGAIHAL  110 (225)
T ss_pred             ECCCCCCCHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHHHHH-------CCCEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf             0258861158999999998457-8978999755322556999986-------4986886368864440166786587554


Q ss_pred             HHCCC
Q ss_conf             72995
Q gi|254781149|r  227 QDFPL  231 (266)
Q Consensus       227 ~~~pl  231 (266)
T Consensus       111 ~~~~l  115 (225)
T TIGR00073       111 KDLPL  115 (225)
T ss_pred             HCCCC
T ss_conf             21688