HHsearch alignment for GI: 254781149 and conserved domain: TIGR02746
>TIGR02746 TraC-F-type type-IV secretion system protein TraC; InterPro: IPR014117 The proteins in this entry are found in the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The proteins contain the Walker A and B motifs and so are putative nucleotide triphosphatases..
Probab=90.08 E-value=0.67 Score=26.48 Aligned_cols=97 Identities=13% Similarity=0.072 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHCC-CCE-EEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCC---CCCH
Q ss_conf 3777776553016-836-8870687414889999999996302232364116753489999999963022323---4785
Q gi|254781149|r 129 LQSVDHLMGGVQL-REL-ILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSS---RIPY 203 (266)
Q Consensus 129 ~~~LD~~~gG~~~-g~L-iviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s---~I~~ 203 (266)
T Consensus 474 l~~~d~F~~~~~~i~NYN~~~~g~sG~GKSf~~Q~~~~~~L~~G~kv~viDvG~Sy~KLC~~lgG--~Yie~~~e~~i~L 551 (900)
T TIGR02746 474 LSAFDPFDSDLLNITNYNIAVVGGSGAGKSFFMQELIVSVLSRGGKVWVIDVGRSYKKLCEMLGG--TYIEFSPESTICL 551 (900)
T ss_pred EEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCC--CEECCCCCCCCCC
T ss_conf 87783033786676771489972889871687989999985179848999607884888765187--1210466776323
Q ss_pred HHCC-----------------CCCCCH----HHHHHHHHHHHHHH
Q ss_conf 5501-----------------788998----99999999999997
Q gi|254781149|r 204 LNLI-----------------RGEINQ----EQYRISQGICEKLQ 227 (266)
Q Consensus 204 ~~l~-----------------~g~l~~----~e~~~i~~a~~~l~ 227 (266)
T Consensus 552 NPFTHL~i~~A~~~~~~~~~~~v~~i~Geqv~~~~~i~~~ia~MA 596 (900)
T TIGR02746 552 NPFTHLDIEEARFDIIDFDGNNVTEIDGEQVDEIDQITALIALMA 596 (900)
T ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 874446600033322673634677567402889999999999884