HHsearch alignment for GI: 254781149 and conserved domain: TIGR03453
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=93.54 E-value=0.7 Score=26.37 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=30.9
Q ss_pred CEEEEE-CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 368870-68741488999999999630223236411675
Q gi|254781149|r 143 ELILIG-ARPSMGKTTFALSTALHMAMSGHGVAFFSLEM 180 (266)
Q Consensus 143 ~Livia-aRP~mGKTa~alnia~~~a~~g~~Vl~fSlEM 180 (266)
T Consensus 105 ~VIav~N~KGGVGKTTtav~LA~~LA~~G~RVLvIDLDP 143 (387)
T TIGR03453 105 QVIAVTNFKGGSGKTTTSAHLAQYLALRGYRVLAIDLDP 143 (387)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 089997888765699999999999997799889995370