HHsearch alignment for GI: 254781149 and conserved domain: TIGR03498
>TIGR03498 FliI_clade3 flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively.
Probab=92.48 E-value=0.14 Score=31.18 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 85111377777655301683688706874148899999999963
Q gi|254781149|r 124 DIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA 167 (266)
Q Consensus 124 Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a 167 (266)
T Consensus 123 ~l~TGIraID~l~p-ig~GQRigIfgg~GvGKt~Ll~~i~~~~~ 165 (418)
T TIGR03498 123 PLDTGVRVIDTFLP-LCRGQRLGIFAGSGVGKSTLLSMLARNTD 165 (418)
T ss_pred CCCCCCCHHHHCCC-CCCCCEEECCCCCCCCHHHHHHHHHHHCC
T ss_conf 43157602120155-02576641137899988899999987507