HHsearch alignment for GI: 254781149 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=91.98 E-value=0.2 Score=30.16 Aligned_cols=100 Identities=21% Similarity=0.194 Sum_probs=56.0
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH-----HHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHH
Q ss_conf 8870687414889999999996302232364116753489-----99999996302232347855501788998999999
Q gi|254781149|r 145 ILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREK-----LGARALSNLLYPSSSRIPYLNLIRGEINQEQYRIS 219 (266)
Q Consensus 145 iviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~q-----l~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i 219 (266)
T Consensus 2 iGitG~pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~sgGalLGDRiRm~~~~-~~~~vfiRs~atrg~~ggla~~~ 80 (148)
T cd03114 2 IGITGVPGAGKSTLIDALITALRARGKRVAVLAIDPSSPFSGGAILGDRIRMERHA-SDPGVFIRSLATRGFLGGLSRAT 80 (148)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHC-CCCCEEEEECCCCCCCCCHHHHH
T ss_conf 76258997878999999999999789837999968887866862032354534415-79983686346666542046889
Q ss_pred HHHHHHHH--HCCCEEECCCCCCHHHHH
Q ss_conf 99999997--299547479988989999
Q gi|254781149|r 220 QGICEKLQ--DFPLIIDDRPSPGIMEFV 245 (266)
Q Consensus 220 ~~a~~~l~--~~pl~IdD~~~~ti~~ir 245 (266)
T Consensus 81 ~~~i~~l~~~g~D~IiIETvGvGQse~~ 108 (148)
T cd03114 81 PEVIRVLDAAGFDVIIVETVGVGQSEVD 108 (148)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHH
T ss_conf 9999999975999899974877756026