HHsearch alignment for GI: 254781149 and conserved domain: cd03215
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=95.74 E-value=0.02 Score=37.19 Aligned_cols=122 Identities=14% Similarity=0.086 Sum_probs=74.4
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCC----------C
Q ss_conf 777776553016836887068741488999999999630223236411675348999999996302232----------3
Q gi|254781149|r 130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSS----------S 199 (266)
Q Consensus 130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~----------s 199 (266)
T Consensus 14 ~aL~~vsl~v~~GEi~~liG~nGaGKSTll~~l~G~~~p~~G~I~~~G~~~~~~~~~~~~~~~i~~vp~~r~~~~l~~~~ 93 (182)
T cd03215 14 GAVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLDL 93 (182)
T ss_pred CCEECEEEEECCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEECCEECCCCCHHHHHHCCEEEEEHHHHHCCCCCCC
T ss_conf 87623178985996999988899992637787669867887759999999886499999978969960207662567899
Q ss_pred CCCHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH-----HHHHHHHHHH
Q ss_conf 47855501-78899899999999999997299547479988989-----9999999999
Q gi|254781149|r 200 RIPYLNLI-RGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM-----EFVHVANGLR 252 (266)
Q Consensus 200 ~I~~~~l~-~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~-----~ira~aR~~k 252 (266)
T Consensus 94 ~v~-en~~~~~~LSGG~~Qrv~lAral~~~p~llllDEPT~gLD~~~~~~i~~~i~~l~ 151 (182)
T cd03215 94 SVA-ENIALSSLLSGGNQQKVVLARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELA 151 (182)
T ss_pred CHH-HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 099-9951855799899999999999971999999868754589999999999999999