HHsearch alignment for GI: 254781149 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=95.81 E-value=0.028 Score=36.13 Aligned_cols=113 Identities=14% Similarity=0.114 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCC
Q ss_conf 13777776553016836887068741488999999999630223236411675348999999996302232347855501
Q gi|254781149|r 128 GLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLI 207 (266)
Q Consensus 128 G~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~ 207 (266)
T Consensus 12 ~~~aL~~vsl~i~~Gei~~lvG~nGaGKSTl~~~i~Gl~~p~~G~i~i~G~~i~~~~~~~~~~--------~gi~~---- 79 (163)
T cd03216 12 GVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARR--------AGIAM---- 79 (163)
T ss_pred CEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHH--------CCCCE----
T ss_conf 999885548898799899999889989999999995776898578999999999999999998--------79948----
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCH-----HHHHHHHHHHH
Q ss_conf 7889989999999999999729954747998898-----99999999999
Q gi|254781149|r 208 RGEINQEQYRISQGICEKLQDFPLIIDDRPSPGI-----MEFVHVANGLR 252 (266)
Q Consensus 208 ~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti-----~~ira~aR~~k 252 (266)
T Consensus 80 v~qLSgG~~Qrv~iaral~~~p~llilDEPt~gLD~~~~~~i~~~l~~l~ 129 (163)
T cd03216 80 VYQLSVGERQMVEIARALARNARLLILDEPTAALTPAEVERLFKVIRRLR 129 (163)
T ss_pred ECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 94699899999999999972999999909755799999999999999998