>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt

Probab=90.96 E-value=0.16 Score=30.80 Aligned_cols=104 Identities=14% Similarity=0.097 Sum_probs=65.0 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCC-------CCEEEECCC--CCHHHHHHHHHHHHHC Q ss_conf 111377777655301683688706874148899999999963-022-------323641167--5348999999996302 Q gi|254781149|r 126 KWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MSG-------HGVAFFSLE--MDREKLGARALSNLLY 195 (266) Q Consensus 126 ~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~g-------~~Vl~fSlE--Ms~~ql~~R~ls~~t~ 195 (266) T Consensus 11 ~~~~~il~~isl~i~~Ge~v~i~G~sGsGKSTLl~~l~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tl~e~------- 83 (166) T cd03223 11 PDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLGTLREQ------- 83 (166) T ss_pred CCCCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHH------- T ss_conf 9999889445889889999999958999889999998698769986799769987999856466588759999------- Q ss_pred CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHH Q ss_conf 232347855501788998999999999999972995474799889899 Q gi|254781149|r 196 PSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIME 243 (266) Q Consensus 196 ~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~ 243 (266) T Consensus 84 -----l~~p~--~~~LSGGqkQRvalARal~~~p~iliLDEpTs~LD~ 124 (166) T cd03223 84 -----LIYPW--DDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166) T ss_pred -----HHCCC--CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH T ss_conf -----63615--467899999999999999649999997585332899

HHsearch alignment for GI: 254781149 and conserved domain: cd03223