HHsearch alignment for GI: 254781149 and conserved domain: cd03226

>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=91.38  E-value=0.79  Score=26.00  Aligned_cols=111  Identities=22%  Similarity=0.217  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HC------CC---------CEEEECCC-------CC-HH
Q ss_conf             1377777655301683688706874148899999999963-02------23---------23641167-------53-48
Q gi|254781149|r  128 GLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MS------GH---------GVAFFSLE-------MD-RE  183 (266)
Q Consensus       128 G~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~------g~---------~Vl~fSlE-------Ms-~~  183 (266)
T Consensus        12 ~~~vL~~vsl~i~~Gei~~iiG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~~   91 (205)
T cd03226          12 GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVRE   91 (205)
T ss_pred             CCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCHHHHHCCEEEEEECCCCCCCHHHHHH
T ss_conf             99786403788869989999889999899999999568577787389999999657874448999627864420647999


Q ss_pred             H-------------HHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHH
Q ss_conf             9-------------99999996302232347855501788998999999999999972995474799889899
Q gi|254781149|r  184 K-------------LGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIME  243 (266)
Q Consensus       184 q-------------l~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~  243 (266)
T Consensus        92 ~l~~~~~~~~~~~~~~~~~l~~~---~l~~~--~~~~~~~LSGGqkQrv~iA~aL~~~P~illLDEPt~gLD~  159 (205)
T cd03226          92 ELLLGLKELDAGNEQAETVLKDL---DLYAL--KERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDY  159 (205)
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHC---CCCHH--HHCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH
T ss_conf             99704878560799999999976---99235--5389112899999999999999759999999799765899