HHsearch alignment for GI: 254781149 and conserved domain: cd03250
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=93.56 E-value=0.3 Score=28.88 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=68.0
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-------HCCCCEEEEC-----------------CCCCHHHH
Q ss_conf 77777655301683688706874148899999999963-------0223236411-----------------67534899
Q gi|254781149|r 130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-------MSGHGVAFFS-----------------LEMDREKL 185 (266)
Q Consensus 130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-------~~g~~Vl~fS-----------------lEMs~~ql 185 (266)
T Consensus 19 ~vL~~isl~i~~Ge~~~IvG~sGsGKSTLl~~i~G~~~~~~G~I~~~g-~i~~v~Q~~~l~~~Tv~eNi~~~~~~~~~~- 96 (204)
T cd03250 19 FTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-SIAYVSQEPWIQNGTIRENILFGKPFDEER- 96 (204)
T ss_pred CEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCC-CEEEEECCCCCCCCCHHHHHHCCCCCCHHH-
T ss_conf 625214899769989999999998589999998189525689522589-889995877567750999974468668899-
Q ss_pred HHHHHHHHHCC-CCCCCCHH---HC-CCC-CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
Q ss_conf 99999963022-32347855---50-178-89989999999999999729954747998898999
Q gi|254781149|r 186 GARALSNLLYP-SSSRIPYL---NL-IRG-EINQEQYRISQGICEKLQDFPLIIDDRPSPGIMEF 244 (266)
Q Consensus 186 ~~R~ls~~t~~-~~s~I~~~---~l-~~g-~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~i 244 (266)
T Consensus 97 ~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~LSgGQkQRvalARal~~~~~illlDEPts~LD~~ 161 (204)
T cd03250 97 YEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAH 161 (204)
T ss_pred HHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf 99999997619889851353524523788757999999999999995399999996987666999