HHsearch alignment for GI: 254781149 and conserved domain: pfam06068
>pfam06068 TIP49 TIP49 C-terminus. This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear
Probab=97.10 E-value=0.0015 Score=44.94 Aligned_cols=56 Identities=23% Similarity=0.362 Sum_probs=43.5
Q ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC------EEEECCCCCHHHHHHHHHHHH
Q ss_conf 530168368870687414889999999996302232------364116753489999999963
Q gi|254781149|r 137 GGVQLRELILIGARPSMGKTTFALSTALHMAMSGHG------VAFFSLEMDREKLGARALSNL 193 (266)
Q Consensus 137 gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~------Vl~fSlEMs~~ql~~R~ls~~ 193 (266)
T Consensus 45 ~~K~aGraiLlaGppGTGKTAlA~aiakeLG~~-vPF~~i~gSEvyS~E~kKTE~L~qafRrs 106 (395)
T pfam06068 45 EGKIAGRAVLIAGPPGTGKTALAIAISKELGED-TPFCPISGSEVYSLEMKKTEALTQAFRKA 106 (395)
T ss_pred HCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-CCEEEEEHHEEECCCCCHHHHHHHHHHHH
T ss_conf 277577389987799988899999999974879-97345001112125654889999999887