HHsearch alignment for GI: 254781149 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=96.83 E-value=0.0076 Score=40.07 Aligned_cols=50 Identities=34% Similarity=0.355 Sum_probs=42.5
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 68368870687414889999999996302232364116753489999999
Q gi|254781149|r 141 LRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARAL 190 (266)
Q Consensus 141 ~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~l 190 (266)
T Consensus 1 ~~~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~ 50 (148)
T smart00382 1 PGEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLL 50 (148)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH
T ss_conf 99789999999702999999999872668996899875998988898765