RPSBLAST alignment for GI: 254781149 and conserved domain: TIGR03600
>gnl|CDD|132639 TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. Length = 421
Score = 95.5 bits (238), Expect = 1e-20
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 69 TATLIRKSMQSFEDIISEVHLTKNQCTGSS------CISIANAATTAMKSAEQQ-KKEGE 121
Q+ E + E TG S ++ ++ +++ +GE
Sbjct: 114 IDLACSDGGQTAEQKVEEAQAALLALTGMSDGQERGFVTFGEVLEDVVRDLDKRFNPKGE 173
Query: 122 NPDIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMS-GHGVAFFSLEM 180
+ GL +D L G+ +LI+IGARPSMGKTT AL+ A ++A+ G V FFSLEM
Sbjct: 174 LTGLSTGLPKLDRLTNGLVKGDLIVIGARPSMGKTTLALNIAENVALREGKPVLFFSLEM 233
Query: 181 DREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPS 238
E+LG R L+ S S I N+ G N + ++L + L IDD
Sbjct: 234 SAEQLGERLLA-----SKSGINTGNIRTGRFNDSDFNRLLNAVDRLSEKDLYIDDTGG 286