HHsearch alignment of GI: 254781152 and MMDB domain: 3go5_A_220-285

>3go5_A (A:220-285) Multidomain protein with S1 RNA-binding domains; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.40A {Streptococcus pneumoniae TIGR4}

Probab=95.30  E-value=0.032  Score=33.74  Aligned_cols=47  Identities=26%  Similarity=0.187  Sum_probs=41.2

Q ss_pred             HHCCCCCCCCHH----HHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCEE
Q ss_conf             000489875027----99977719999999999999985391899389242
Q gi|254781152|r    4 LYDRGGSIPDND----KYIAGVCGCSIRRWRNIRAILEKFNKIFIQEGNIY   50 (155)
Q Consensus         4 MYdrGgPL~~N~----r~LAg~CGCSvKkFr~aLd~Ll~~GKI~l~DG~LW   50 (155)
                      |=++||-+|.++    +.+..+.|+|++.|-+|+-.|++.++|.+.+++++
T Consensus        14 L~~~gG~lpl~DKS~pe~I~~~fg~SKkaFKrAiG~L~K~~~I~i~~~gI~   64 (66)
T 3go5_A           14 LESNGGFXTLNDKSSPDDIKATFGISKGQFKKALGGLXKAGKIKQDQFGTE   64 (66)
T ss_dssp             HHHTTTEESCCTTSCHHHHHHHHSSCHHHHHHHHHHHHHTTCEEEETTEEE
T ss_pred             HHHCCCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCEEE
T ss_conf             997699213799999999999979079999999888865877999389799