Query gi|254781154|ref|YP_003065567.1| hypothetical protein CLIBASIA_05305 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 65
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 11:31:09 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781154.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2akza1 c.1.11.1 (A:140-433) E 7.7 31 0.0023 15.4 -0.6 26 3-28 163-188 (294)
2 d2i6ea1 c.94.1.1 (A:16-287) Hy 7.2 75 0.0054 13.5 1.2 13 11-23 134-146 (272)
3 d2al1a1 c.1.11.1 (A:142-436) E 5.3 53 0.0039 14.2 -0.4 26 3-28 164-189 (295)
4 d2czla1 c.94.1.1 (A:3-272) Hyp 5.3 1.2E+02 0.0085 12.6 1.3 17 12-28 138-154 (270)
5 d1x7fa1 b.62.1.2 (A:245-361) O 4.8 1.3E+02 0.0092 12.4 2.3 27 8-34 57-83 (117)
6 d1vkfa_ c.1.29.1 (A:) Glycerol 3.6 84 0.0061 13.3 -0.5 36 25-60 19-54 (172)
7 d1zbma1 c.94.1.1 (A:2-261) Hyp 3.3 1.7E+02 0.013 11.7 1.9 18 12-29 137-154 (260)
8 d2ohwa1 d.79.8.1 (A:3-130) Unc 2.7 2E+02 0.015 11.4 1.4 17 7-23 97-113 (128)
9 d1wmhb_ d.15.2.2 (B:) Partitio 2.7 2E+02 0.015 11.4 1.4 15 19-33 66-80 (82)
10 d2ptza1 c.1.11.1 (A:139-429) E 2.4 1.1E+02 0.0079 12.7 -1.0 21 3-23 163-185 (291)
No 1
>d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Probab=7.69 E-value=31 Score=15.38 Aligned_cols=26 Identities=23% Similarity=0.578 Sum_probs=20.7
Q ss_pred CEEEEECCEEEEEEECHHHCCHHEEE
Q ss_conf 00243102008998512100012157
Q gi|254781154|r 3 SWLKLQRDFGVVLIGDKAFNTYRSQL 28 (65)
Q Consensus 3 swlklqrdfgvvligdkafntyrsql 28 (65)
+|-+|.+.+|+-++||..|.|-...+
T Consensus 163 gw~~lt~~lg~~ivGDDl~vTn~~rl 188 (294)
T d2akza1 163 AWSKFTANVGIQIVGDDLTVTNPKRI 188 (294)
T ss_dssp HHHHHHHTCSSEEEESTTTTTCHHHH
T ss_pred HHHHHHHHCCCEEECCCCCCCCHHHH
T ss_conf 69999872496797553235558888
No 2
>d2i6ea1 c.94.1.1 (A:16-287) Hypothetical protein DR0370 {Deinococcus radiodurans [TaxId: 1299]}
Probab=7.23 E-value=75 Score=13.52 Aligned_cols=13 Identities=46% Similarity=0.654 Sum_probs=8.6
Q ss_pred EEEEEEECHHHCC
Q ss_conf 0089985121000
Q gi|254781154|r 11 FGVVLIGDKAFNT 23 (65)
Q Consensus 11 fgvvligdkafnt 23 (65)
=+.++|||.|+-.
T Consensus 134 da~llIGD~AL~~ 146 (272)
T d2i6ea1 134 DGVLRIGDDALRE 146 (272)
T ss_dssp SEEEEESHHHHHH
T ss_pred CEEEEEHHHHHHH
T ss_conf 7665411456420
No 3
>d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.33 E-value=53 Score=14.24 Aligned_cols=26 Identities=15% Similarity=0.417 Sum_probs=20.0
Q ss_pred CEEEEECCEEEEEEECHHHCCHHEEE
Q ss_conf 00243102008998512100012157
Q gi|254781154|r 3 SWLKLQRDFGVVLIGDKAFNTYRSQL 28 (65)
Q Consensus 3 swlklqrdfgvvligdkafntyrsql 28 (65)
+|-+|.+..|.-++||..|.|-...+
T Consensus 164 gw~~lt~~~g~~iVGDDl~~Tn~~rl 189 (295)
T d2al1a1 164 AWSHFFKTAGIQIVADDLTVTNPKRI 189 (295)
T ss_dssp HHHHHHTTCCSEEEESTTTTTCHHHH
T ss_pred HHHHHHHCCCCEEECCHHHCCCCHHH
T ss_conf 89988622696243431213561343
No 4
>d2czla1 c.94.1.1 (A:3-272) Hypothetical protein TTHA1568 {Thermus thermophilus [TaxId: 274]}
Probab=5.26 E-value=1.2e+02 Score=12.56 Aligned_cols=17 Identities=24% Similarity=0.294 Sum_probs=10.8
Q ss_pred EEEEEECHHHCCHHEEE
Q ss_conf 08998512100012157
Q gi|254781154|r 12 GVVLIGDKAFNTYRSQL 28 (65)
Q Consensus 12 gvvligdkafntyrsql 28 (65)
+.++|||.|+.-.+..+
T Consensus 138 a~LlIGD~Al~~~~~~~ 154 (270)
T d2czla1 138 AGLIIHESRFTYPRYGL 154 (270)
T ss_dssp EEEECTTHHHHGGGGTC
T ss_pred EEEECCHHHHHCCCCCC
T ss_conf 26860778753000256
No 5
>d1x7fa1 b.62.1.2 (A:245-361) Outer surface protein, C-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=4.81 E-value=1.3e+02 Score=12.40 Aligned_cols=27 Identities=30% Similarity=0.770 Sum_probs=23.5
Q ss_pred ECCEEEEEEECHHHCCHHEEEEEEEEC
Q ss_conf 102008998512100012157888861
Q gi|254781154|r 8 QRDFGVVLIGDKAFNTYRSQLRILITD 34 (65)
Q Consensus 8 qrdfgvvligdkafntyrsqlrilitd 34 (65)
.|.-|-|+|....+..|...|.|...|
T Consensus 57 ~r~rGdItIdN~~ygrY~GElQI~~~d 83 (117)
T d1x7fa1 57 LQERGQVVIGNNSFGKYKGELQIILKE 83 (117)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEECSC
T ss_pred CCCCCEEEEECCCCCCCCCEEEEEECC
T ss_conf 622550998668764534587788145
No 6
>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon antiterminator-related protein TM1436 {Thermotoga maritima [TaxId: 2336]}
Probab=3.64 E-value=84 Score=13.27 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=26.4
Q ss_pred HEEEEEEEECCHHHHHHCCCCCCCCCCCCEEEEEEE
Q ss_conf 215788886152553307532000022225887653
Q gi|254781154|r 25 RSQLRILITDNLSALISSDKNITESGKEGIVKMDLS 60 (65)
Q Consensus 25 rsqlrilitdnlsalissdknitesgkegivkmdls 60 (65)
.++.-.+..-++..|-+--+.+.+.||..+|.+||-
T Consensus 19 ~~~~iflL~g~I~~l~~~v~~~k~~gK~v~VHiDLi 54 (172)
T d1vkfa_ 19 EPDVVFLLKSDILNLKFHLKILKDRGKTVFVDMDFV 54 (172)
T ss_dssp CSSEEEECCEETTTHHHHHHHHHHTTCEEEEEGGGE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 899999956828889999999998699899986404
No 7
>d1zbma1 c.94.1.1 (A:2-261) Hypothetical protein AF1704 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=3.28 E-value=1.7e+02 Score=11.72 Aligned_cols=18 Identities=17% Similarity=0.148 Sum_probs=11.7
Q ss_pred EEEEEECHHHCCHHEEEE
Q ss_conf 089985121000121578
Q gi|254781154|r 12 GVVLIGDKAFNTYRSQLR 29 (65)
Q Consensus 12 gvvligdkafntyrsqlr 29 (65)
+.++|||.||.-.+..+.
T Consensus 137 a~LlIgD~Al~~~~~~~~ 154 (260)
T d1zbma1 137 AGLLIHEGQITYADYGLK 154 (260)
T ss_dssp EEEECSGGGGTGGGGTCE
T ss_pred CCCCCCHHHCCCCCCCCE
T ss_conf 213168765577513880
No 8
>d2ohwa1 d.79.8.1 (A:3-130) Uncharacterized protein YueI {Bacillus subtilis [TaxId: 1423]}
Probab=2.73 E-value=2e+02 Score=11.40 Aligned_cols=17 Identities=29% Similarity=0.561 Sum_probs=9.6
Q ss_pred EECCEEEEEEECHHHCC
Q ss_conf 31020089985121000
Q gi|254781154|r 7 LQRDFGVVLIGDKAFNT 23 (65)
Q Consensus 7 lqrdfgvvligdkafnt 23 (65)
.+-+||+|+..|.|.|-
T Consensus 97 ~~t~~gLVv~s~~Avn~ 113 (128)
T d2ohwa1 97 FHTPLGIVIAADIAVNR 113 (128)
T ss_dssp SCCSEEEEEEESSCCCC
T ss_pred CCCCCEEEEEECCCCCC
T ss_conf 78983899970874066
No 9
>d1wmhb_ d.15.2.2 (B:) Partitioning defective-6 homolog alpha, PAR-6 alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.73 E-value=2e+02 Score=11.40 Aligned_cols=15 Identities=27% Similarity=0.494 Sum_probs=9.1
Q ss_pred HHHCCHHEEEEEEEE
Q ss_conf 210001215788886
Q gi|254781154|r 19 KAFNTYRSQLRILIT 33 (65)
Q Consensus 19 kafntyrsqlrilit 33 (65)
||+.+-+.-|||+|.
T Consensus 66 kA~~sa~PlLRi~iQ 80 (82)
T d1wmhb_ 66 RALASGPPPLRLLVQ 80 (82)
T ss_dssp HHTTSSSSCEEEEEE
T ss_pred HHHHHCCCCEEEEEE
T ss_conf 998716970237677
No 10
>d2ptza1 c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [TaxId: 5691]}
Probab=2.43 E-value=1.1e+02 Score=12.74 Aligned_cols=21 Identities=14% Similarity=0.297 Sum_probs=0.0
Q ss_pred CEEEEECCEE--EEEEECHHHCC
Q ss_conf 0024310200--89985121000
Q gi|254781154|r 3 SWLKLQRDFG--VVLIGDKAFNT 23 (65)
Q Consensus 3 swlklqrdfg--vvligdkafnt 23 (65)
+|-+|...+| +.++||..|.|
T Consensus 163 gw~~lt~~~g~k~~iVGDDL~vT 185 (291)
T d2ptza1 163 GFAGITEALKGKTQIVGDDLTVT 185 (291)
T ss_dssp HHHHHHHHTTTTSEEEESTTTTT
T ss_pred HHHHHHHCCCCEEEEECCCCCCC
T ss_conf 79986411686599844755346
Done!