HHsearch alignment for GI: 254781158 and conserved domain: COG0760
>COG0760 SurA Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones].
Probab=99.84 E-value=1.4e-19 Score=145.66 Aligned_cols=264 Identities=21% Similarity=0.249 Sum_probs=156.1
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHCCCC-CCCEEEEECCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 22689999999999999831310103678-88428999987848999999999999999987088999789986013899
Q gi|254781158|r 10 RTWVAKIFLVVLFVPFLIWGLSDALFSVS-GSSTVVSVGRQKVPFSSFINSWKQELGMISQKIGFVVNSERARSVGLDKK 88 (631)
Q Consensus 10 ~s~~~~ii~~l~~~~f~~~g~~~~~~~~~-~~~~va~V~g~~I~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~q 88 (631)
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----------------------~~ 60 (320)
T COG0760 3 NSAIAKILLGLIALAFAAFGVSASLVAGVVNAGAVAKVGAQEISAKEKLNAQQKER----------------------NI 60 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HH
T ss_conf 88999999999999999986100245543005789875477663268999873116----------------------66
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q ss_conf 9999999999999999849824889999999634765542102398999999986110056776788877544455---5
Q gi|254781158|r 89 ILDNLVSGATLDQFIEDIGLEADHGRVWGEIARSPLFHGKDNKFSHDVFVSRLAREGINEKEYIDHYTKMLSRTDV---V 165 (631)
Q Consensus 89 vl~~li~~~ll~~~a~~~gi~vsd~~v~~~i~~~p~Fq~~~G~Fd~~~~~~~L~~~g~t~~~~~~~~~~~l~~~~l---~ 165 (631)
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (320)
T COG0760 61 ALEQLGEQLLLLQAAAELGIKISQQVVAQLIAEIAVLD-KL---AKELLLGLSDEQGKQLIAEKPAFQDVEGKFDARAYL 136 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999987776777777777999998776689988-98---999999888765221454789999999989999999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 43014542200222334554321112333210000123456789889999976566655545443322221100000001
Q gi|254781158|r 166 GMFVGGMRPSNLLLDQAKRFYFENRSVDYIVLNNRHVPAIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDVHEKEKK 245 (631)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~~~~~~~~~~td~el~~yy~~nk~~f~~pe~~~i~yv~~~~~~~~~~ 245 (631)
T Consensus 137 ~~~~~-----------------------------------~~~~~----------------------------------- 146 (320)
T COG0760 137 KRLRI-----------------------------------KGLTE----------------------------------- 146 (320)
T ss_pred HHHHH-----------------------------------CCCCH-----------------------------------
T ss_conf 99876-----------------------------------03765-----------------------------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHHHHHHHHHCCC----CCCCCCCCC
Q ss_conf 257889998755554555433211237887530000147888753036-----51478877520112----365245316
Q gi|254781158|r 246 IEISNDELQAEYEKNKEKYFSPEIRTVEQLVFPNQKEADEAFQSLKKG-----KKFIQLAEEQGKSL----SDISLGSFS 316 (631)
Q Consensus 246 ~~vt~~ei~~~Y~~~~~~f~~pe~~~~~~i~~~~~~~A~~~~~~l~~g-----~~F~~la~~~~~~~----~~~~lg~~~ 316 (631)
T Consensus 147 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~~~~~~~~~~~~~~f~~~a~~~s~~~~~~~~g~~~~~~~ 224 (320)
T COG0760 147 --EQEAEALRDKLQNKQQGKKVTEVQARHILVKAEAKAKEALALLKKGVREAKADFAELAKKQSEDPSSKNGGGLLGWNK 224 (320)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCCC
T ss_conf --469999999998876310034554543103324656999999873242200347999998366825420576333245
Q ss_pred HHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 2322675677764202366722567861772112110233301344554322333345
Q gi|254781158|r 317 KEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSNIKPSFTVSFQEVKKDIANQ 374 (631)
Q Consensus 317 ~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~~~~~~~~~~~~evk~~I~~~ 374 (631)
T Consensus 225 ~~~~~-p~f~~a~~~~-~~g~~~~pv~t~~g~~ii~v~~~~~~~~~-~~~~~~~~~~~ 279 (320)
T COG0760 225 KGQLV-PEFRKAAFIL-KVGEVSAPVKTSFGYHIIKVEKKRDAKLD-FPEVKAVKEIS 279 (320)
T ss_pred CCCCC-HHHHHHHHHC-CCCCCCCCEEECCEEEEEEEECCCCCCCC-CHHHHHHHHHH
T ss_conf 67667-8899999756-67871675567665899831034553345-34889999998