HHsearch alignment for GI: 254781158 and conserved domain: PRK02998

Probab=98.51  E-value=1.1e-05  Score=55.06  Aligned_cols=114  Identities=19%  Similarity=0.234  Sum_probs=60.8

Q ss_pred             HCCCCHHHHHHHCCCCEEEC---CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCCCCC-CHHH-
Q ss_conf             36999789898639814402---562226554235798999998616888720345169956999997058788-9878-
Q gi|254781158|r  512 KEGKNFRDIGKNLGASLLTT---NQINRMDNENKFFGYDGISQVFSGPVEMVKCFPIENGLSYVVFKVTNSKVG-PVQE-  586 (631)
Q Consensus       512 ~~g~~l~~~a~~~~~~~~~~---~~i~r~~~~~~~~~~~~~~~iF~~~~g~~~~~~~~~~~~~~v~~v~~~~~~-~~~~-  586 (631)
T Consensus       156 ~~G~dF~~lAk~yS~D~~s~~~GG~Lg~~--~~g~~~~~f~~Aaf~L~~G~vS-~PVkt~~GyHIIkv~dk~~~~~~~~~  232 (283)
T PRK02998        156 NNGEDFAALAKQYSEDTGSKEQGGEISGF--APGQTVKEFEEAAYKLDAGQVS-EPVKTTYGYHIIKVTDKKELKPFDEV  232 (283)
T ss_pred             HCCCCHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHCCCCCCCC-CCEEECCEEEEEEEECCCCCCCHHHH
T ss_conf             77998999999958996644358866767--9998078999999759999948-87787886799998016889999999


Q ss_pred             HHHHHHHHHHHHHHH----HHHHHHHHHHHHCCCCCCHHHHHHHHC
Q ss_conf             999999999999999----999999999988298136899988645
Q gi|254781158|r  587 KDKFISYLTQMMNKD----LLDSVIAYLKSQYSVTVHDNLIQRYLD  628 (631)
Q Consensus       587 ~~~~~~~l~~~~~~~----~~~~~~~~Lr~~a~I~iN~~~l~~~~~  628 (631)
T Consensus       233 K~~l~~~i~~~k~~d~~~~~~~~vi~~~lkkanV~ikD~~lk~~~~  278 (283)
T PRK02998        233 KDSIRKDLEQQRLQDTTGKWKQQVVNDLLKDADIKVNDKEFKDTFK  278 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             9999999999997554789999999999987798766388899999