HHsearch alignment for GI: 254781158 and conserved domain: PRK03002
>PRK03002 prsA peptidylprolyl isomerase; Reviewed.
Probab=100.00 E-value=1.1e-33 Score=238.02 Aligned_cols=234 Identities=17% Similarity=0.324 Sum_probs=179.4
Q ss_pred HHHHHHHHCCCHHHCCCCCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999983131010367888428999987848999999999999999987088999789986013899999999999999
Q gi|254781158|r 21 LFVPFLIWGLSDALFSVSGSSTVVSVGRQKVPFSSFINSWKQELGMISQKIGFVVNSERARSVGLDKKILDNLVSGATLD 100 (631)
Q Consensus 21 ~~~~f~~~g~~~~~~~~~~~~~va~V~g~~I~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~qvl~~li~~~ll~ 100 (631)
T Consensus 12 ~~svl~LaaC~~----~~~~~~VAtv~g~~IT~~df~~~lk~-------~--------------~g~~~l~~mi~~kvl~ 66 (285)
T PRK03002 12 LISILMLSACGQ----KNSSATVATATDSTITKSDFEKQLKD-------R--------------YGKDMLYEMMAQDVIT 66 (285)
T ss_pred HHHHHHHHHHCC----CCCCCEEEEECCCEECHHHHHHHHHH-------H--------------HHHHHHHHHHHHHHHH
T ss_conf 999999998457----99997799868978739999999998-------8--------------7899999999999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 99998498248899999996347655421023989999999861100-56776788877544455543014542200222
Q gi|254781158|r 101 QFIEDIGLEADHGRVWGEIARSPLFHGKDNKFSHDVFVSRLAREGIN-EKEYIDHYTKMLSRTDVVGMFVGGMRPSNLLL 179 (631)
Q Consensus 101 ~~a~~~gi~vsd~~v~~~i~~~p~Fq~~~G~Fd~~~~~~~L~~~g~t-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 179 (631)
T Consensus 67 ~~y-----kvs~~ev~~e~~~~k~---qyg----~~f~~~L~q~glt~e~~~k~qi~~~l~~~~~~k------------- 121 (285)
T PRK03002 67 KKY-----KVSDDDVDKEVQKAKS---QYG----DQFKNVLENNGLKDEADFKNQIKFKLAMNEAIK------------- 121 (285)
T ss_pred HHH-----CCCHHHHHHHHHHHHH---HHH----HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH-------------
T ss_conf 861-----2689999999999999---987----899999998699758999999999999999986-------------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 33455432111233321000012345678988999997656665554544332222110000000125788999875555
Q gi|254781158|r 180 DQAKRFYFENRSVDYIVLNNRHVPAIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDVHEKEKKIEISNDELQAEYEK 259 (631)
Q Consensus 180 ~~~~~~~~~~r~i~~~~~~~~~~~~~~~~td~el~~yy~~nk~~f~~pe~~~i~yv~~~~~~~~~~~~vt~~ei~~~Y~~ 259 (631)
T Consensus 122 ------------------------------------------------------------------~~vtd~d~k~~Y~- 134 (285)
T PRK03002 122 ------------------------------------------------------------------KSVTEKDVKDHYK- 134 (285)
T ss_pred ------------------------------------------------------------------CCCCHHHHHHHCC-
T ss_conf ------------------------------------------------------------------3288999998618-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC----CCCCCCCCCCHHHCCCHHHHHHHHCCCCC
Q ss_conf 45554332112378875300001478887530365147887752011----23652453162322675677764202366
Q gi|254781158|r 260 NKEKYFSPEIRTVEQLVFPNQKEADEAFQSLKKGKKFIQLAEEQGKS----LSDISLGSFSKEYIPDVSLADSIFSLAKK 335 (631)
Q Consensus 260 ~~~~f~~pe~~~~~~i~~~~~~~A~~~~~~l~~g~~F~~la~~~~~~----~~~~~lg~~~~~~~~~~~~~~a~f~l~~~ 335 (631)
T Consensus 135 --------pev~~~hIlv~~e~~A~~v~~~l~~G~dF~~lAk~~S~D~~s~~~GG~lg~~~~~~~~-~ef~~aaf~L-~~ 204 (285)
T PRK03002 135 --------PEIKASHILVSDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMA-PEFETAAYKL-KV 204 (285)
T ss_pred --------CCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC-HHHHHHHHHC-CC
T ss_conf --------7638888777899999999999887999999999968993010048616635898766-7999999828-99
Q ss_pred CCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 722567861772112110233301344554322333345679999888
Q gi|254781158|r 336 GDFTPVIHGSFGYVIAHVSNIKPSFTVSFQEVKKDIANQMRITKASEK 383 (631)
Q Consensus 336 G~is~pv~t~~G~~iikv~~~~~~~~~~~~evk~~I~~~l~~~~a~~~ 383 (631)
T Consensus 205 GeiS~pv~t~~GyhIIk~~dk~~--~~~~~~~k~~i~~~i~~~k~~d~ 250 (285)
T PRK03002 205 GQISNPVKSPNGYHIIKLTDKKD--LKPYDEVKDSIRKNLEEERIADP 250 (285)
T ss_pred CCCCCCEEECCEEEEEEEEECCC--CCCHHHHHHHHHHHHHHHHHHCH
T ss_conf 88687877478169999841688--99989999999999999986677