HHsearch alignment for GI: 254781158 and conserved domain: PRK10788
>PRK10788 peptidyl-prolyl cis-trans isomerase (rotamase D); Provisional.
Probab=99.92 E-value=3.6e-21 Score=156.10 Aligned_cols=323 Identities=12% Similarity=0.143 Sum_probs=204.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45678988999997656665554544332222110000000125788999875555455543321123788753000014
Q gi|254781158|r 204 AIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDVHEKEKKIEISNDELQAEYEKNKEKYFSPEIRTVEQLVFPNQKEA 283 (631)
Q Consensus 204 ~~~~~td~el~~yy~~nk~~f~~pe~~~i~yv~~~~~~~~~~~~vt~~ei~~~Y~~~~~~f~~pe~~~~~~i~~~~~~~A 283 (631)
T Consensus 171 ~~~~~~~~e~~~~~~~~------~q~R~v~~~~i~~~~~~~~~~vtd~el~~yY~~nk~~f~~pe~~~i~yv~l~~~~~~ 244 (622)
T PRK10788 171 GTDFMLPGETDELAALV------LQQRVVREATIDVNALAAKQTVTDQEIQSYYDQNKNNFMAPEQFRVSYIKLDAATMQ 244 (622)
T ss_pred HCCCCCHHHHHHHHHHH------HHHHEEEEEEECHHHHCCCCCCCHHHHHHHHHHCHHHHCCCCEEEEEEEEECHHHHC
T ss_conf 42667999999999997------421146889974677056689999999999995655406863488899983566702
Q ss_pred HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHH
Q ss_conf 78887530365147887752011236524531623226756777642023667225678617721121102333013445
Q gi|254781158|r 284 DEAFQSLKKGKKFIQLAEEQGKSLSDISLGSFSKEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSNIKPSFTVS 363 (631)
Q Consensus 284 ~~~~~~l~~g~~F~~la~~~~~~~~~~~lg~~~~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~~~~~~~~~~ 363 (631)
T Consensus 245 ~~--------vs~~ei~~~Y~~~--------------------~~~~~~pe~r~~---------~~I-~~~~-------- 278 (622)
T PRK10788 245 QT--------VSDADIQAYYDQH--------------------QDQFTQPERKRY---------SII-QTKT-------- 278 (622)
T ss_pred CC--------CCHHHHHHHHHHH--------------------HHHCCCCHHEEE---------EEE-ECCC--------
T ss_conf 45--------8999999999987--------------------775177411664---------301-0589--------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 54322333345679999888886556577654201100124554085320013---444112345654322111116888
Q gi|254781158|r 364 FQEVKKDIANQMRITKASEKVKEDYKRLEEFLALGTSMDEISRREKIVSIDLP---LVDFAGKDVKGKEVAAIPYKEQLL 440 (631)
Q Consensus 364 ~~evk~~I~~~l~~~~a~~~~~~~~~~i~d~~~~g~~l~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 440 (631)
T Consensus 279 -------------~~~--------A~~~~~~l~~G~dFa~lA~~~S~D~~Sa~~gGdLG~~~~g~---------~~~~f~ 328 (622)
T PRK10788 279 -------------EDE--------AKAVLDELKKGADFATLAKEKSTDIISARNGGDMGWLEDAT---------TPDELK 328 (622)
T ss_pred -------------HHH--------HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC---------CHHHHH
T ss_conf -------------999--------99999998769986999998378953212477313426664---------428999
Q ss_pred HHHHHCCCCCCCCCCEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 87531123467765111369749999980232233466788899999999999999999999999999998369997898
Q gi|254781158|r 441 FRVFGKDDPLSKDHTVALPDGSYMWVQIKESIPARDRKLEEVLTDVKKDWKTVKTAEEVSSKANQLVLEYSKEGKNFRDI 520 (631)
Q Consensus 441 ~~~f~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~evk~~V~~~~~~~k~~~~~~~~a~~~~~~~~~~g~~l~~~ 520 (631)
T Consensus 329 ~a~~~-~~-GevS~pV~t~fG-~hiikv~~i~~~~~~~~eevk~eI~~~l~~~~a~~~~~~~~~~~~d~~~~~~~~l~~~ 405 (622)
T PRK10788 329 NAGLK-EK-GQLSGVIKSSVG-FLIVRLDDIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAASNDNESLAGA 405 (622)
T ss_pred HHHHH-CC-CCCCCCEEECCC-EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 98874-67-986784760782-3899983246677899899999999999999999999999999988763264114889
Q ss_pred HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCC-------CCCCCEEEECCCCCEEEEEEECCCCCCCHHHH----HH
Q ss_conf 98639814402562226554235798999998616-------88872034516995699999705878898789----99
Q gi|254781158|r 521 GKNLGASLLTTNQINRMDNENKFFGYDGISQVFSG-------PVEMVKCFPIENGLSYVVFKVTNSKVGPVQEK----DK 589 (631)
Q Consensus 521 a~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~iF~~-------~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~----~~ 589 (631)
T Consensus 406 a~~~~l~~~~t~~~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~~g~~sd~i~~~~~~~~v~rv~~~~p~~~~~l~eVk~~ 485 (622)
T PRK10788 406 EQAAGVKAVQTGWFSRDNVPAELNFKPVADAIFNGGLVGENGAPGSNSDIITVDGDRAFVLRISEHKPEAVKPLADVRDQ 485 (622)
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCHHHHHHH
T ss_conf 98659735742775766664334536899986035665430367777872796698099999846687878999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999
Q gi|254781158|r 590 FISYLTQMMNKDLLDSVIAYLK 611 (631)
Q Consensus 590 ~~~~l~~~~~~~~~~~~~~~Lr 611 (631)
T Consensus 486 V~~~~~~~~~~~~a~~~a~~ll 507 (622)
T PRK10788 486 VTALVKHQKAEQQAKVDAEKLL 507 (622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999