HHsearch alignment for GI: 254781158 and conserved domain: pfam09312
>pfam09312 SurA_N SurA N-terminal domain. This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.
Probab=99.65 E-value=9.5e-15 Score=114.18 Aligned_cols=116 Identities=19% Similarity=0.255 Sum_probs=101.3
Q ss_pred CEEEEECCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 42899998784899999999999999998708899978998601389999999999999999998498248899999996
Q gi|254781158|r 41 STVVSVGRQKVPFSSFINSWKQELGMISQKIGFVVNSERARSVGLDKKILDNLVSGATLDQFIEDIGLEADHGRVWGEIA 120 (631)
Q Consensus 41 ~~va~V~g~~I~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~qvl~~li~~~ll~~~a~~~gi~vsd~~v~~~i~ 120 (631)
T Consensus 3 ~IvAiVN~~iIt~~el~~~~~~~~~~~~~~-~~~~~~~~----~l~~~vL~~LI~~~L~~q~A~~~gi~vsd~evd~~i~ 77 (118)
T pfam09312 3 RIVAVVNDGVILQSELDRRVKTVKRQLAKQ-GTQLPPDA----VLRRQVLERLILERIQLQMAERTGIRVDDEQLNQAIA 77 (118)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHC-CCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 268888992648999999999999999865-89999289----9999999999999999999998599998999999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 347655421023989999999861100567767888775444555
Q gi|254781158|r 121 RSPLFHGKDNKFSHDVFVSRLAREGINEKEYIDHYTKMLSRTDVV 165 (631)
Q Consensus 121 ~~p~Fq~~~G~Fd~~~~~~~L~~~g~t~~~~~~~~~~~l~~~~l~ 165 (631)
T Consensus 78 ~ia----~~n~~s~~~~~~~L~~~G~~~~~~r~~ir~qil~~klr 118 (118)
T pfam09312 78 RIA----QQNNMTLDQLRAALAADGLSYDEFREQIRKEMLISRLR 118 (118)
T ss_pred HHH----HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 999----88598999999999984999999999999999999709