HHsearch alignment of GI: 254781158 and MMDB domain: 1j6y_A_
>1j6y_A (A:) Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana}
Probab=99.69 E-value=3.3e-19 Score=142.88 Aligned_cols=129 Identities=14% Similarity=0.243 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Q ss_conf 9997656665554544332222110000000125788999875555455543321123788753000014----788875
Q gi|254781158|r 214 TQWFEKYKDNYRAPEYKRISYILFDVHEKEKKIEISNDELQAEYEKNKEKYFSPEIRTVEQLVFPNQKEA----DEAFQS 289 (631)
Q Consensus 214 ~~yy~~nk~~f~~pe~~~i~yv~~~~~~~~~~~~vt~~ei~~~Y~~~~~~f~~pe~~~~~~i~~~~~~~A----~~~~~~ 289 (631)
++||+.++.++..++.+...+ .+.+.|||+||++||++|+++|..++ ++||.+++.++| +++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~--------~~~i~vtd~ei~~~y~~~~~~~~~~~---~~~I~~~~~~~a~~~~~~~~~~ 71 (139)
T 1j6y_A 3 SSHHHHHHSSGLVPRGSHMAS--------RDQVKASHILIKHQGSRRKASWKDPE---GKIILTTTREAAVEQLKSIRED 71 (139)
T ss_dssp -----------------CCSS--------CCSCEEECCEECSCTTSSSSSCSCCC---SCCCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCC--------CCEEEEEEEEECCCCCCCCHHCCCCC---CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 654433212576777655478--------01289998998157755520002432---1111202299999999999999
Q ss_pred HHC-CCCHHHHHHHHHCC---CCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCC
Q ss_conf 303-65147887752011---2365245316232267567776420236672256786177211211023
Q gi|254781158|r 290 LKK-GKKFIQLAEEQGKS---LSDISLGSFSKEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSN 355 (631)
Q Consensus 290 l~~-g~~F~~la~~~~~~---~~~~~lg~~~~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~~ 355 (631)
+++ |.+|+++|+.+|.+ ..+|..||+..+.++ ++|++++|+| ++|++|+|++++.|||||||+.
T Consensus 72 ~~~~~~~F~~~a~~~s~~~~~~~~g~~~~~~~~~l~-~~~~~~~~~l-~~Geis~pi~~~~g~~Iikv~a 139 (139)
T 1j6y_A 72 IVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQ-KPFEEATYAL-KVGDISDIVDTDSGVHIIKRTA 139 (139)
T ss_dssp HHSSCCCCHHHHHHSSCHHHHHTCSEEEECSSSSSC-THHHHHHHHC-CSSSCCSCEEETTEEECCCSCC
T ss_pred HHCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCC-HHHHHHHHHC-CCCCCCCCEEECCEEEEEEEEC
T ss_conf 874842799999995841002568612046124167-8999999848-8998476579599079999939