HHsearch alignment of GI: 254781158 and MMDB domain: 1t11_A_121-151_258-392
>1t11_A (A:121-151,A:258-392) Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae}
Probab=94.24 E-value=0.26 Score=25.92 Aligned_cols=136 Identities=11% Similarity=0.152 Sum_probs=66.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 489999999999999999870889997899860138999-------9999999999999998498248899999996347
Q gi|254781158|r 51 VPFSSFINSWKQELGMISQKIGFVVNSERARSVGLDKKI-------LDNLVSGATLDQFIEDIGLEADHGRVWGEIARSP 123 (631)
Q Consensus 51 I~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~qv-------l~~li~~~ll~~~a~~~gi~vsd~~v~~~i~~~p 123 (631)
++-.+...++... +-+++.+..+..-+.....++.+. ..+.....++.+.++...+.++...|...+...
T Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~~TleeLk~~ire~le~~~~~~~~~~~~~~ild~L~e~~~~dlPeslv~~e~~~l- 91 (166)
T 1t11_A 15 VTDADVAEMLETL--RKQQRFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALIDQEINVL- 91 (166)
T ss_dssp --CTHHHHHHHHH--HHHHGGSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTBCSCCCEEECHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHH--HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-
T ss_conf 3207899999998--7652708754557899999999999999999998888789999997436679807899999999-
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 65542102398999999986110056-77678887754445554301454220022233455432111233321000012
Q gi|254781158|r 124 LFHGKDNKFSHDVFVSRLAREGINEK-EYIDHYTKMLSRTDVVGMFVGGMRPSNLLLDQAKRFYFENRSVDYIVLNNRHV 202 (631)
Q Consensus 124 ~Fq~~~G~Fd~~~~~~~L~~~g~t~~-~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~~~~ 202 (631)
...|...+.+.|++.+ .|.+.++......-....+.. .+. -
T Consensus 92 ----------~~~~~~~l~~~g~~~ee~~~ee~~~~Aek~vK~~lil~----------~IA------------------~ 133 (166)
T 1t11_A 92 ----------RQQAAQRFGGNVEAAAQLPRELFEEQAKRRVVVGLLLG----------EVI------------------R 133 (166)
T ss_dssp ----------HHHHHHHSSCSHHHHTTSCGGGTHHHHHHHHHHHHHHH----------HHH------------------H
T ss_pred ----------HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHH------------------H
T ss_conf ----------99999882778344446678899999999999999999----------999------------------9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 3456789889999976566655545
Q gi|254781158|r 203 PAIADPSNAVLTQWFEKYKDNYRAP 227 (631)
Q Consensus 203 ~~~~~~td~el~~yy~~nk~~f~~p 227 (631)
...+.||+++|..++..--..|..+
T Consensus 134 ~e~I~vseeEi~~~i~~~A~~yg~~ 158 (166)
T 1t11_A 134 THELKADEEKVKALITEMATAYEDP 158 (166)
T ss_dssp HTTCCCCHHHHHHHHHHHHHCC---
T ss_pred HHCCCCCHHHHHHHHHHHHHHCCCH
T ss_conf 9789889999999999999846998