HHsearch alignment of GI: 254781158 and MMDB domain: 2kgj_A_
>2kgj_A (A:) Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=99.65 E-value=1.4e-17 Score=132.25 Aligned_cols=98 Identities=22% Similarity=0.380 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC----CCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCEEE
Q ss_conf 332112378875300001478887530365147887752011----2365245316232267567776420236672256
Q gi|254781158|r 265 FSPEIRTVEQLVFPNQKEADEAFQSLKKGKKFIQLAEEQGKS----LSDISLGSFSKEYIPDVSLADSIFSLAKKGDFTP 340 (631)
Q Consensus 265 ~~pe~~~~~~i~~~~~~~A~~~~~~l~~g~~F~~la~~~~~~----~~~~~lg~~~~~~~~~~~~~~a~f~l~~~G~is~ 340 (631)
++|++++++||+++++++|++++.+|++|.+|+++|+++|.+ .++|++||++++.+| ++|+.++| + ++|++|+
T Consensus 1 ~~p~~v~~~~I~~~~~~~A~~~~~~l~~g~~F~~lA~~~S~d~~~~~~gG~lg~~~~~~l~-~~~~~~~~-l-~~G~vs~ 77 (102)
T 2kgj_A 1 TQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIP-DELKNAGL-K-EKGQLSG 77 (102)
T ss_dssp CCCCEEEEEEEEESSHHHHHHHHHHHHHTSCHHHHHHHTCTTHHHHTTTSEEEEEETTCCC-HHHHTTCC-C-STTCEEE
T ss_pred CCCCEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCC-HHHHHHHH-H-CCCCCCC
T ss_conf 9841687521640899999999999887999999999867896523447755235588889-79999998-2-8998343
Q ss_pred EEEECCCCHHHHHCCCCCHHHHHHH
Q ss_conf 7861772112110233301344554
Q gi|254781158|r 341 VIHGSFGYVIAHVSNIKPSFTVSFQ 365 (631)
Q Consensus 341 pv~t~~G~~iikv~~~~~~~~~~~~ 365 (631)
|+++++||||+||.+++++..+|||
T Consensus 78 pi~~~~G~~I~~v~~~~~~~~~~~E 102 (102)
T 2kgj_A 78 VIKSSVGFLIVRLDDIQAAHHHHHH 102 (102)
T ss_dssp EEEETTEEEEEEEEEEECSSTTSCC
T ss_pred CEEECCEEEEEEEEEEECCCCCCCC
T ss_conf 5797999999999368655544569