HHsearch results for GI: 254781158 and protein with PDBid: 2itk_A
>2itk_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; PIN1, isomerase, WW domain; HET: D11 NAL PE4; 1.45A {Homo sapiens} SCOP: b.72.1.1 d.26.1.1 PDB: 2q5a_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 1f8a_B* 3kad_A* 3kaf_A* 2zr6_A* 1nmv_A 1pin_A* 2zr4_A* 2zr5_A* 2zqt_A* 2zqs_A* 2zqv_A* 2zqu_A 2f21_A* 1zcn_A* ...
Probab=99.54 E-value=8.7e-16 Score=119.52 Aligned_cols=72 Identities=22% Similarity=0.357 Sum_probs=63.1
Q ss_pred HHHHHHHHHHCC-CCHHHHHHHHHCC---CCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCC
Q ss_conf 147888753036-5147887752011---2365245316232267567776420236672256786177211211023
Q gi|254781158|r 282 EADEAFQSLKKG-KKFIQLAEEQGKS---LSDISLGSFSKEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSN 355 (631)
Q Consensus 282 ~A~~~~~~l~~g-~~F~~la~~~~~~---~~~~~lg~~~~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~~ 355 (631)
.|++++.++.+| .+|++||+++|.+ ..||+|||+.++.|+ ++|++++|+| ++|+||+||+|++|||||++++
T Consensus 92 ~~~~i~~~i~~g~~~F~~lA~~~Sd~~s~~~gGdlG~~~~~~~~-~~f~~~~~~l-~~Geis~pi~t~~G~HIi~~~d 167 (167)
T 2itk_A 92 LINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQ-KPFEDASFAL-RTGEMSGPVFTDSGIHIILRTE 167 (167)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEECTTSSC-HHHHHHHHHS-CTTCBCCCEEETTEEEEEEECC
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHCC-CCCCCCCCEECCCEEEEEEEEC
T ss_conf 99999999860332799999985745332236845521367577-8999999818-9998378688289079999949