HHsearch results for GI: 254781158 and protein with PDBid: 3i6c_A
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=99.60 E-value=9.6e-17 Score=125.79 Aligned_cols=92 Identities=20% Similarity=0.293 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHCC-CCHHHHHHHHHCC---CCCCCCCCCC
Q ss_conf 554332112378875300---------------------00147888753036-5147887752011---2365245316
Q gi|254781158|r 262 EKYFSPEIRTVEQLVFPN---------------------QKEADEAFQSLKKG-KKFIQLAEEQGKS---LSDISLGSFS 316 (631)
Q Consensus 262 ~~f~~pe~~~~~~i~~~~---------------------~~~A~~~~~~l~~g-~~F~~la~~~~~~---~~~~~lg~~~ 316 (631)
..+..|++++++||+++. .+.|+.++.++++| .+|+++|+++|.+ ..+|++||+.
T Consensus 7 ~~~~~p~~vr~~HILi~~~~~~~~~~~~~~~~~~~k~eA~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~s~~~gG~lg~~~ 86 (123)
T 3i6c_A 7 NGQGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFS 86 (123)
T ss_dssp ----CCSEEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEEE
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 67999758999989983688778122100232430999999999999999807440999999957894102499544216
Q ss_pred HHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCC
Q ss_conf 232267567776420236672256786177211211023
Q gi|254781158|r 317 KEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSN 355 (631)
Q Consensus 317 ~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~~ 355 (631)
.+.|+ ++|++++|+| ++|+||+||+|++|||||+|++
T Consensus 87 ~~~l~-~ef~~a~~~l-~~G~iS~pi~t~~G~HIi~v~e 123 (123)
T 3i6c_A 87 RGQMQ-KPFEDASFAL-RTGEMSGPVFTDSGIHIILRTE 123 (123)
T ss_dssp TTTSC-HHHHHHHHHS-CTTCBCSCEEETTEEEEEEECC
T ss_pred CCCCC-HHHHHHHHCC-CCCCCCCCEEECCCEEEEEEEC
T ss_conf 88757-1788766338-9998777588089179999839