HHsearch results for GI: 254781158 and protein with PDBid: 3i6c_A

>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=99.60  E-value=9.6e-17  Score=125.79  Aligned_cols=92  Identities=20%  Similarity=0.293  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHCC-CCHHHHHHHHHCC---CCCCCCCCCC
Q ss_conf             554332112378875300---------------------00147888753036-5147887752011---2365245316
Q gi|254781158|r  262 EKYFSPEIRTVEQLVFPN---------------------QKEADEAFQSLKKG-KKFIQLAEEQGKS---LSDISLGSFS  316 (631)
Q Consensus       262 ~~f~~pe~~~~~~i~~~~---------------------~~~A~~~~~~l~~g-~~F~~la~~~~~~---~~~~~lg~~~  316 (631)
                      ..+..|++++++||+++.                     .+.|+.++.++++| .+|+++|+++|.+   ..+|++||+.
T Consensus         7 ~~~~~p~~vr~~HILi~~~~~~~~~~~~~~~~~~~k~eA~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~s~~~gG~lg~~~   86 (123)
T 3i6c_A            7 NGQGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFS   86 (123)
T ss_dssp             ----CCSEEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEEE
T ss_pred             CCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             67999758999989983688778122100232430999999999999999807440999999957894102499544216


Q ss_pred             HHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCC
Q ss_conf             232267567776420236672256786177211211023
Q gi|254781158|r  317 KEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSN  355 (631)
Q Consensus       317 ~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~~  355 (631)
                      .+.|+ ++|++++|+| ++|+||+||+|++|||||+|++
T Consensus        87 ~~~l~-~ef~~a~~~l-~~G~iS~pi~t~~G~HIi~v~e  123 (123)
T 3i6c_A           87 RGQMQ-KPFEDASFAL-RTGEMSGPVFTDSGIHIILRTE  123 (123)
T ss_dssp             TTTSC-HHHHHHHHHS-CTTCBCSCEEETTEEEEEEECC
T ss_pred             CCCCC-HHHHHHHHCC-CCCCCCCCEEECCCEEEEEEEC
T ss_conf             88757-1788766338-9998777588089179999839