HHSEARCH alignment of GI: 254781158 and SCOP domain: d2pv2a1

Alignment

Probab=96.58  E-value=0.0066  Score=33.83  Aligned_cols=76  Identities=17%  Similarity=0.174  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECC--CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEC
Q ss_conf             999999999998369997898986398144025--622265542357989999986168887203451699569999970
Q gi|254781158|r  500 SSKANQLVLEYSKEGKNFRDIGKNLGASLLTTN--QINRMDNENKFFGYDGISQVFSGPVEMVKCFPIENGLSYVVFKVT  577 (631)
Q Consensus       500 ~~~a~~~~~~~~~~g~~l~~~a~~~~~~~~~~~--~i~r~~~~~~~~~~~~~~~iF~~~~g~~~~~~~~~~~~~~v~~v~  577 (631)
                      +..+.++...+ +.|.+|+.+++.+...-....  .+.+.  ....+++++...+|++++|+++ .|...+.+|.|++|.
T Consensus        25 ~~~a~~~~~~l-~~g~~F~~la~~~S~~~~~~~gG~lg~~--~~~~l~~~~~~~i~~l~~G~is-~pi~t~~G~hIikl~  100 (103)
T d2pv2a1          25 ESQARAIVDQA-RNGADFGKLAIAHSADQQALNGGQMGWG--RIQELPGIFAQALSTAKKGDIV-GPIRSGVGFHILKVN  100 (103)
T ss_dssp             HHHHHHHHHHH-HTTCCHHHHHHHHCCSTTGGGTTEEEEE--EGGGSBHHHHHHHHTCCTTCEE-EEEEETTEEEEEEEE
T ss_pred             HHHHHHHHHHH-HCCCCHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHCCCCCCC-CCEEECCEEEEEEEE
T ss_conf             99999999998-8699989983331225441100110113--3223532566666326899888-758979999999996


Q ss_pred             CC
Q ss_conf             58
Q gi|254781158|r  578 NS  579 (631)
Q Consensus       578 ~~  579 (631)
                      ++
T Consensus       101 ~~  102 (103)
T d2pv2a1         101 DL  102 (103)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             57

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Porin chaperone SurA, PPIase domains
species: Escherichia coli [TaxId: 562]