BLAST/PSIBLAST alignment of GI: 254781158 and GI: 116252238 at iteration 1
>gi|116252238|ref|YP_768076.1| peptidyl-prolyl cis-trans isomerase D [Rhizobium leguminosarum bv. viciae 3841] Length = 630
>gi|115256886|emb|CAK07980.1| putative peptidyl-prolyl cis-trans isomerase D [Rhizobium leguminosarum bv. viciae 3841] Length = 630
 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/635 (33%), Positives = 363/635 (57%), Gaps = 19/635 (2%)

Query: 1   MLEIIRKASRTWVAKIFLVVLFVPFLIWGLSDALFSVSGSSTVVSVGRQKVPFSSFINSW 60
           M  I+R+A++TWVAK+ L++L   F +WG+S  L S   S+TVV+VG Q V  + F  ++
Sbjct: 1   MFHILRRAAQTWVAKLLLLLLVASFGVWGVSHELLSGGNSTTVVTVGDQHVDVNEFHLAY 60

Query: 61  KQELGMISQKIGFVVNSERARSVGLDKKILDNLVSGATLDQFIEDIGLEADHGRVWGEIA 120
           ++++  +SQ+ G  +  E+AR+ G+++++L  LV+GA+LDQ  ED+ L     R+   IA
Sbjct: 61  QRQVANLSQQFGTRLTPEQARAFGVEQQVLAQLVAGASLDQLAEDMNLGLSEDRLAQLIA 120

Query: 121 RSPLFHGKDNKFSHDVFVSRLAREGINEKEYIDHYTKMLSRTDVVGMFVGGMRPSNLLLD 180
             P F   + +F  ++F+SRL   GI + +YI   +K+  R+ VV     G      L+D
Sbjct: 121 DDPAFKAVNGRFDRELFISRLQNAGIRQDDYIKERSKVAVRSQVVDAISNGFTAPKTLVD 180

Query: 181 QAKRFYFENRSVDYIVLNNRHVPAIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDVH 240
             K +  E+RSV+Y++L N ++  I  P++ VL  WFE  K  YRAPEY+++ Y+     
Sbjct: 181 ALKLYGDESRSVEYLLLTNANIEPIKAPADDVLATWFEGVKQRYRAPEYRKLVYLKLQPG 240

Query: 241 EKEKKIEISNDELQAEYEKNKEKYFSPEIRTVEQLVFPNQKEADEAFQSLKKGKKFIQLA 300
           +      +++D++   ++K+K+ Y +PE RT+EQL F ++  A  A  +LK G  F QL 
Sbjct: 241 DIADAATVTDDQIHEAFDKSKDTYRTPESRTIEQLTFASKDLAAAAETALKSGTSFDQLV 300

Query: 301 EEQGKSLSDISLGSFSKEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSNIKPSF 360
            +QGK+ SD+ LG F+++ +PD ++AD+ F++++ G  TPV+ GSFG VI  V+NIK   
Sbjct: 301 SDQGKTASDVLLGEFTEDKVPDQAVADAAFAVSRDGGTTPVVDGSFGPVILRVTNIKSET 360

Query: 361 TVSFQEVKKDIANQMRITKASEKVKEDYKRLEEFLALGTSMDEISRREKIVSIDLPLVDF 420
             +F EVK+DI  Q+ ++ AS++V   + R+E+  A G+++++I+ +  + ++ +  VD 
Sbjct: 361 AKNFDEVKEDIRKQLALSNASQEVINVHDRIEDLRAGGSTLEDIAGQLNLKAMTVDAVDM 420

Query: 421 AGKDVKGKEVAAIPYKEQLLFRVF----GKDDPLSKDHTVALPDGS--YMWVQIKESIPA 474
            G D  GKEV  IP K+QLL   F    G D P        LP G+  Y+W  ++E  P 
Sbjct: 421 TGADKDGKEVKDIPAKQQLLGEAFKTEVGVDAP-------PLPIGNDGYVWFNVREITPD 473

Query: 475 RDRKLEEVLTDVKKDWKTVKTAEEVSSKANQLVLEYSKEGKNFRDIGKNLGASLLTTNQI 534
           RDR + EV     +DW   +   E++ KA+ L  E +K+G    DI   LG ++ + + +
Sbjct: 474 RDRPVTEVREKAVEDWTAEQQKAELAKKADALKAE-AKKGTALADIATPLGIAVESKSGV 532

Query: 535 NRMDNENKFFGYDGISQVFSGPVEMVKCFPIENGLSYVVFKVTNSKVGP----VQEKDKF 590
            R   ++   G  G++  FSGPV+ V      +  + ++ KVT     P    +  +D  
Sbjct: 533 TR-STDDAVLGRAGVTAAFSGPVDTVASAVGADPSTQILLKVTEVNTQPTGDVLNNRDAQ 591

Query: 591 ISYLTQMMNKDLLDSVIAYLKSQYSVTVHDNLIQR 625
           I+ +      D+LD ++  L++QY   ++  L ++
Sbjct: 592 ITAMANAAGDDILDQMVNLLQTQYGAQINQTLAEQ 626