RPSBLAST alignment of GI: 254781158 and protein with PDBid: 1m5y
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A Length = 408
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/361 (13%), Positives = 103/361 (28%), Gaps = 59/361 (16%)
Query: 85 LDKKILDNLVSGATLDQFIEDIGLEADHGRVWGEIARSPLFHGKDNKFSHDVFVSRLARE 144
L +I++ L+ + Q + +G++ ++ IA K N + D SRLA +
Sbjct: 46 LRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIA----KQNNMTLDQMRSRLAYD 101
Query: 145 GINEKEYIDHYTKMLSRTDVVGMFVGG------MRPSNLLLDQAKRFYFENRSVDYIVLN 198
G+N Y + K + ++V V +L + +L
Sbjct: 102 GLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILI 161
Query: 199 NRHVPAIADPSNAVLTQW------------FEKYKDNYRAPEYKRISYILFDVHEKEK-- 244
+D N +Q F K + A + + +E
Sbjct: 162 PLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPG 221
Query: 245 ------------------KIEISNDELQAEYEKNKEKYFSPEIRTVEQLVFPNQKEADEA 286
+ + L+ + + K S ++ +
Sbjct: 222 IFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDE 281
Query: 287 F----------QSLKKGKKFIQLA----EEQGKSLSDISLGSFSKEYIPDVSLADSIFSL 332
F A ++ G + LG + + + D++ L
Sbjct: 282 QARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDP-AFRDALTRL 340
Query: 333 AKKGDFTPVIHGSFGYVIAHVSNIKPSFTVSFQEVKKDIANQMRITKASEKVKEDYKRLE 392
KG + +H SFG+ + + + + + K + K SE+ +
Sbjct: 341 -NKGQMSAPVHSSFGWHLIELLDTRNV-DKTDAAQKDRAYRMLMNRKFSEEAASWMQEQR 398
Query: 393 E 393
Sbjct: 399 A 399