HHsearch results for GI: 254781160 and protein with PDBid: 1v6z_A

Probab=100.00  E-value=0  Score=398.10  Aligned_cols=224  Identities=28%  Similarity=0.435  Sum_probs=187.3

Q ss_pred             CCCCEEEECCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEE-EEEECCCCCCCCCE
Q ss_conf             77877740854478888998779875998703578988899997799879875302355523899-75413555544313
Q gi|254781160|r    5 SHLKRLFVDFPLCIKTQGKASGDQYHYLAHVLRMKEGDNILLFNGKDGEWLSKISYVGKSIRFKV-EYQSRSQTKQSDVQ   83 (245)
Q Consensus         5 ~~m~R~f~~~~l~~~~~i~L~~~~~hHl~kVlRlk~Gd~i~i~dg~g~~~~~~I~~~~k~~~~~i-~~~~~~~~~~~~i~   83 (245)
                      +|.||+|++.     .++.|+++++|||.||||+++||.|.||||+| .|.|+|.+++++..+.+ ......+.++++++
T Consensus         1 ~~~~r~~~~~-----~~~~L~~~e~~Hl~~VLR~k~Gd~i~v~dg~g-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~   74 (228)
T 1v6z_A            1 MRPHRAFSPG-----LTGVLPLRETRHLVEVLRARVGDRFTVFDGER-EALAEVVDLGPPLRYRVLEERRPEREVGVEVV   74 (228)
T ss_dssp             -CCCEEECGG-----GCSBCCHHHHHHHHTTSCCCTTCEEEEECSSC-EEEEEEEECCSSCEEEEEEEECCCCSCSSCEE
T ss_pred             CCCCEECCCC-----CEEECCHHHHHHHHHCCCCCCCCEEEEEECCC-CEEEEEEECCCCEEEEEEEECCCCCCCCCCEE
T ss_conf             9986560899-----96747989988999668199999999997998-88999997168538999864054558885158


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             5413445411567775444456656555542022011---2212233578899997512344343320000001123332
Q gi|254781160|r   84 YIFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQNT---HYNMDRVRTYTISAAEQCDILTLPFIYPPTTLEFLLKNWD  160 (245)
Q Consensus        84 l~~~~~k~~~~~~ilqk~tELGV~~I~p~~~~rs~~~---~~k~eR~~~ii~eA~eQsgr~~lP~i~~~~~l~~~l~~~~  160 (245)
                      |++|++|+++|||++||+|||||++|+|++++||+.+   ..+++||++|+++|||||||+++|+|+.|.+|+++++...
T Consensus        75 l~~~l~k~~~~e~il~k~tELGV~~I~p~~sers~~~~~~~~k~~R~~~ii~~A~~Qsgr~~lP~I~~~~~~~~~~~~~~  154 (228)
T 1v6z_A           75 LYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEMGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVAQ  154 (228)
T ss_dssp             EEEECCSTTHHHHHHHHHHHTTCSEEEEEECTTCSCSCCCHHHHHHHHHHHHHHHHHTTCSSCCEECCCEEGGGCCCCSS
T ss_pred             EEEECCCCHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             99730280789999999884311799997003442122201102137899999999649944662147647788876544


Q ss_pred             CCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             23332126300012110222100367883599988888888899999995799558636887400448999999999998
Q gi|254781160|r  161 HNCQIVFADETCGSENSLEKLHAIAHIPNVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDTAAVAAMALVQAI  240 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEGGfs~~E~~~l~~~~~~~~vsLG~~ILR~ETA~i~als~~~~~  240 (245)
                      .   .+++....   ...  .......++++++||||||||++|+++|+++|| .+++||++|||+|||+|+|+|++++.
T Consensus       155 ~---~~~~~~~~---~~~--~~~~~~~~~i~i~IGPEGGfs~~Ei~~~~~~~~-~~v~LG~~ILR~ETA~i~alsi~~~~  225 (228)
T 1v6z_A          155 G---LVAHVGAT---ARV--REVLDPEKPLALAVGPEGGFAEEEVALLEARGF-TPVSLGRRILRAETAALALLALCTAG  225 (228)
T ss_dssp             E---EEECTTCC---CCH--HHHCCTTSCEEEEECCTTCCCHHHHHHHHHHTE-EEECCCSSCCCHHHHHHHHHHHHTGG
T ss_pred             H---HHHHCCCC---CCC--CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC-EEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             4---33200222---232--312356760699967987889999999997898-89767998245785999999999997


Q ss_pred             HCC
Q ss_conf             478
Q gi|254781160|r  241 CGD  243 (245)
Q Consensus       241 ~g~  243 (245)
                      +|+
T Consensus       226 ~gr  228 (228)
T 1v6z_A          226 EGR  228 (228)
T ss_dssp             GTC
T ss_pred             HCC
T ss_conf             684