HHsearch results for GI: 254781160 and protein with PDBid: 2egv_A

>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=100.00  E-value=0  Score=399.02  Aligned_cols=222  Identities=16%  Similarity=0.233  Sum_probs=189.2

Q ss_pred             CCEEEECCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCC-CEEEEEEEECCCCCCCCCEEE
Q ss_conf             8777408544788889987798759987035789888999977998798753023555-238997541355554431354
Q gi|254781160|r    7 LKRLFVDFPLCIKTQGKASGDQYHYLAHVLRMKEGDNILLFNGKDGEWLSKISYVGKS-IRFKVEYQSRSQTKQSDVQYI   85 (245)
Q Consensus         7 m~R~f~~~~l~~~~~i~L~~~~~hHl~kVlRlk~Gd~i~i~dg~g~~~~~~I~~~~k~-~~~~i~~~~~~~~~~~~i~l~   85 (245)
                      |||||+++  ..++.+.|+++++||+ ||||+++||.|.++|+ |+.|.|+|++++++ +.+++......+.+++.++|+
T Consensus         1 M~~f~~~~--~~~~~~~l~~~~~~Hi-kVlR~k~gd~i~v~~~-g~~~~~~I~~~~k~~~~~~i~~~~~~~~~~~~i~l~   76 (229)
T 2egv_A            1 MHVFYSEE--RRGNLLILREGEVKHF-RVRRIEKDEEFGVIHE-GKIYVCKVRREDKREISCEIVEELETKLPPKDITLY   76 (229)
T ss_dssp             CCEEECSC--EETTEEEEETHHHHHH-HHTTCCTTCCEEEEET-TEEEEEEEEEECSSEEEEEEEEECCCCCCSSEEEEE
T ss_pred             CCEEECCC--CCCCEEEECCCCEEEE-EEEECCCCCEEEEEEC-CEEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEE
T ss_conf             98994788--8799899770000577-8984589999999949-919999999943880899985402467998742899


Q ss_pred             ECCCCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             134454-11567775444456656555542022011----2212233578899997512344343320000001123332
Q gi|254781160|r   86 FSPIKT-NRLDYMIQKSVEMGMGAIRPVITRYTQNT----HYNMDRVRTYTISAAEQCDILTLPFIYPPTTLEFLLKNWD  160 (245)
Q Consensus        86 ~~~~k~-~~~~~ilqk~tELGV~~I~p~~~~rs~~~----~~k~eR~~~ii~eA~eQsgr~~lP~i~~~~~l~~~l~~~~  160 (245)
                      ++++|+ ++|||+|||+|||||++|+|+.|+||+.+    .+|++||++|+++|||||||+++|.|..|.+|+++++..+
T Consensus        77 ~~~~k~~~~~e~ilek~tELGV~~i~p~~sers~~~~~~~~~k~eR~~~ii~eA~~Qs~r~~~p~i~~~~~l~~~l~~~~  156 (229)
T 2egv_A           77 QSVTVDLKTMDTIVRQATELGVLTFVPIISERSFQKEEAILKKTEKWKRIVIEAMKQSRRPIPMEIKKPVRLSDLIPESE  156 (229)
T ss_dssp             EECCSSTHHHHHHHHHHHHHTCCEEEEEECTTSCCCHHHHHHHHHHHHHHHHHHHHHHTCCSCCEECCCEEGGGCCCCSS
T ss_pred             EECCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             83211045799999998881822999874330210137787789999999999861215677875324567999985343


Q ss_pred             CCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf             2333212630001211022210036788359998888888889999999579955863688740044899999999999
Q gi|254781160|r  161 HNCQIVFADETCGSENSLEKLHAIAHIPNVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDTAAVAAMALVQA  239 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEGGfs~~E~~~l~~~~~~~~vsLG~~ILR~ETA~i~als~~~~  239 (245)
                      ....+..+++.   .   .........++++++||||||||++|+++|.++|| .+++||++|||||||+++|+|+++.
T Consensus       157 ~~~~~~~~~~~---~---~~~~~~~~~~~~~i~IGPEGGfs~~E~~~l~~~g~-~~v~LG~~ILR~ETA~i~als~l~~  228 (229)
T 2egv_A          157 ENIILDNFYEG---V---KPKDVNLEAKTYSVVVGPEGGFSKRESQILREKGF-KSVLLEPYTLRTETAVVSIVSILMN  228 (229)
T ss_dssp             EEEEECTTSCC---B---CGGGSCTTCSEEEEEECCTTCCCHHHHHHHHHTTC-EEECCSSSCCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHC---C---CCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCC-EEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             11111223310---3---52123320254158980788999999999998799-8976699825177599999999840