HHSEARCH alignment of GI: 254781160 and SCOP domain: d1nxza2

Alignment
>d1nxza2 c.116.1.5 (A:74-247) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
Probab=100.00  E-value=0  Score=325.43  Aligned_cols=163  Identities=27%  Similarity=0.394  Sum_probs=141.1

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH------HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             55443135413445411567775444456656555542022011------221223357889999751234434332000
Q gi|254781160|r   77 TKQSDVQYIFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQNT------HYNMDRVRTYTISAAEQCDILTLPFIYPPT  150 (245)
Q Consensus        77 ~~~~~i~l~~~~~k~~~~~~ilqk~tELGV~~I~p~~~~rs~~~------~~k~eR~~~ii~eA~eQsgr~~lP~i~~~~  150 (245)
                      +++.+|+|+|+++|+++|||+|||+|||||++|+|++++||+.+      .++++||++|+++|||||||+++|+|.++.
T Consensus         2 e~~~~i~l~~al~k~~~~~~ilqk~tELGV~~i~p~~s~rs~~~~~~~~~~~k~~r~~~i~~~A~eQsgr~~lP~i~~~~   81 (174)
T d1nxza2           2 ESHLKIHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQWQKIAIAACEQCGRNIVPEIRPLM   81 (174)
T ss_dssp             CCSSCEEEEEECCSSSCHHHHHHHHHHTTCCEEEEEECTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCSSCCEECCCE
T ss_pred             CCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf             99963899995127625999999998008035896157645323106678860899999999998732733255314102


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHH
Q ss_conf             00011233322333212630001211022210036788359998888888889999999579955863688740044899
Q gi|254781160|r  151 TLEFLLKNWDHNCQIVFADETCGSENSLEKLHAIAHIPNVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDTAA  230 (245)
Q Consensus       151 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEGGfs~~E~~~l~~~~~~~~vsLG~~ILR~ETA~  230 (245)
                      +|+++++..+....+.+++...   .....+ .....++++++||||||||++|+++|+++|| .+++||+||||+|||+
T Consensus        82 ~l~~~l~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~i~iiIGPEGGfs~~E~~~~~~~g~-~~v~LG~~ILR~ETA~  156 (174)
T d1nxza2          82 KLQDWCAENDGALKLNLHPRAH---YSIKTL-PTIPAGGVRLLIGSEGGLSAQEIAQTEQQGF-TEILLGKRVLRTETAS  156 (174)
T ss_dssp             EHHHHHHCCSSCEEEEECTTCS---CBGGGC-CCCCTTCEEEEECCTTCCCHHHHHHHHHTTC-EEEBCCSSCCCHHHHH
T ss_pred             HHHHHHHHHCCHHHHHHHHHHH---HHHHHH-CCCCCCCEEEEECCCCCCCHHHHHHHHHCCC-EEEECCCCCCHHHHHH
T ss_conf             3778876401014443201234---455432-0278874799974776869899999997798-6866899812687699


Q ss_pred             HHHHHHHHHHHCCC
Q ss_conf             99999999984786
Q gi|254781160|r  231 VAAMALVQAICGDW  244 (245)
Q Consensus       231 i~als~~~~~~g~~  244 (245)
                      ++|+|++++++|||
T Consensus       157 i~als~l~~~~gdl  170 (174)
T d1nxza2         157 LAAISALQICFGDL  170 (174)
T ss_dssp             HHHHHHHHHHHSST
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             99999999994653


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: YggJ C-terminal domain-like
domain: Hypothetical protein HI0303
species: Haemophilus influenzae [TaxId: 727]