HHSEARCH alignment of GI: 254781160 and SCOP domain: d1v6za1

Alignment

Probab=96.55  E-value=0.0035  Score=38.45  Aligned_cols=52  Identities=27%  Similarity=0.455  Sum_probs=43.2

Q ss_pred             CEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEE
Q ss_conf             88998779875998703578988899997799879875302355523899754
Q gi|254781160|r   20 TQGKASGDQYHYLAHVLRMKEGDNILLFNGKDGEWLSKISYVGKSIRFKVEYQ   72 (245)
Q Consensus        20 ~~i~L~~~~~hHl~kVlRlk~Gd~i~i~dg~g~~~~~~I~~~~k~~~~~i~~~   72 (245)
                      -+-.|.-.+.+||+.|||.+.||.+.+|||. .+..+++.+.+..+...+.++
T Consensus         8 ltgvlpl~e~rhlvevlra~vgdrftvfd~~-realaevvdlgpp~ryrilee   59 (63)
T d1v6za1           8 LTGVLPLRETRHLVEVLRARVGDRFTVFDGE-REALAEVVDLGPPLRYRVLEE   59 (63)
T ss_dssp             GCSBCCHHHHHHHHTTSCCCTTCEEEEECSS-CEEEEEEEECCSSCEEEEEEE
T ss_pred             CCEEEECHHCCHHHHHHHHCCCCCEEEECCH-HHHHHHHHHCCCCHHHHHHHH
T ss_conf             5344251210049999985247624772543-889999872287521033455

SCOP domain information

class: All beta proteins
fold: PUA domain-like
superfamily: PUA domain-like
family: YggJ N-terminal domain-like
domain: Hypothetical protein TTHA0657 (TT1575)
species: Thermus thermophilus [TaxId: 274]