HHSEARCH alignment of GI: 254781160 and SCOP domain: d1vhka2

Alignment
>d1vhka2 c.116.1.5 (A:74-253) Hypothetical protein YqeU {Bacillus subtilis [TaxId: 1423]}
Probab=100.00  E-value=1.4e-45  Score=315.85  Aligned_cols=166  Identities=24%  Similarity=0.294  Sum_probs=141.9

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH------HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             5443135413445411567775444456656555542022011------2212233578899997512344343320000
Q gi|254781160|r   78 KQSDVQYIFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQNT------HYNMDRVRTYTISAAEQCDILTLPFIYPPTT  151 (245)
Q Consensus        78 ~~~~i~l~~~~~k~~~~~~ilqk~tELGV~~I~p~~~~rs~~~------~~k~eR~~~ii~eA~eQsgr~~lP~i~~~~~  151 (245)
                      .+.+|+|+++++|+++|||++||+|||||++|+|+.++||+.+      ..+++||++|+++|||||||+++|+|+.+.+
T Consensus         4 ~p~~i~L~~~l~K~~~~~~ilqk~tELGV~~i~p~~s~rs~~~~~~~~~~~~~~r~~~i~~eA~eQsgr~~lP~i~~~~~   83 (180)
T d1vhka2           4 LPIKVYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYRNEVPRVMDVHS   83 (180)
T ss_dssp             CSSEEEEEEECCSTTHHHHHHHHHHHTTCCEEEEECCTTCCCC---------HHHHHHHHHHHHHHTTCSSCCEECCCBC
T ss_pred             CCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             88577999940376469999999983181558850035653223411456559999999999998643666543536788


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHCCCCCHH----HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHH
Q ss_conf             0011233322333212630001211022----210036788359998888888889999999579955863688740044
Q gi|254781160|r  152 LEFLLKNWDHNCQIVFADETCGSENSLE----KLHAIAHIPNVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSD  227 (245)
Q Consensus       152 l~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~i~IGPEGGfs~~E~~~l~~~~~~~~vsLG~~ILR~E  227 (245)
                      |+++++..+..+.++++++.........    ........+++.++||||||||++|+++|.++|| .+++||+||||+|
T Consensus        84 l~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEGGfs~~E~~~l~~~g~-~~v~LG~~ILR~E  162 (180)
T d1vhka2          84 FQQLLQRMQDFDKCVVAYEESSKQGEISAFSAIVSSLPKGSSLLIVFGPEGGLTEAEVERLTEQDG-VTCGLGPRILRTE  162 (180)
T ss_dssp             HHHHHHHGGGSSEEEEECC--------CHHHHHHHTCCTTCEEEEEECCTTCCCHHHHHHHHHTTC-EEECCCSSCCCTT
T ss_pred             HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC-EEEECCCCCCHHH
T ss_conf             999997553444189870333444324678888750577870899966888989999999998899-8987899812677


Q ss_pred             HHHHHHHHHHHHHHCCC
Q ss_conf             89999999999984786
Q gi|254781160|r  228 TAAVAAMALVQAICGDW  244 (245)
Q Consensus       228 TA~i~als~~~~~~g~~  244 (245)
                      ||+++|+|+++|++..+
T Consensus       163 TA~i~als~l~~~~~l~  179 (180)
T d1vhka2         163 TAPLYALSAISYQTELL  179 (180)
T ss_dssp             THHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             49999999999998761


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: YggJ C-terminal domain-like
domain: Hypothetical protein YqeU
species: Bacillus subtilis [TaxId: 1423]