HHSEARCH alignment of GI: 254781160 and SCOP domain: d2qmma1

Alignment

Probab=94.38  E-value=0.057  Score=30.50  Aligned_cols=82  Identities=22%  Similarity=0.283  Sum_probs=57.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHH
Q ss_conf             00000112333223332126300012110222100367883599988888888899999995799558636887400448
Q gi|254781160|r  149 PTTLEFLLKNWDHNCQIVFADETCGSENSLEKLHAIAHIPNVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDT  228 (245)
Q Consensus       149 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEGGfs~~E~~~l~~~~~~~~vsLG~~ILR~ET  228 (245)
                      -.+|++.++.+.....+++.++.....      ......++.+++.|=-=||+++|.+.++..+. ..+||||..|=+..
T Consensus       108 ~~~~e~~l~e~~~~~~~~~Ld~~G~~i------~~~~~~~~~~FILsDh~~l~~~e~~~L~~~~~-~~iSLGp~~L~a~h  180 (194)
T d2qmma1         108 RKGLEELIEELSEKYSIIYLKEDGVDI------SNAQLPPNPLFVIGDHEGLTEEQEKVVERYAA-LKLSLSPLSLLAEQ  180 (194)
T ss_dssp             CCCHHHHHHHHHHHSEEEEEEEEEEEG------GGSCCCSSEEEEEECTTCCCHHHHHHHHTTCS-EEEECCSSCCCHHH
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCCCC------CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCC-EEEECCCCCCCHHH
T ss_conf             888999999986469689988989862------22336999869975899988678887764277-14753654225346


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254781160|r  229 AAVAAMALV  237 (245)
Q Consensus       229 A~i~als~~  237 (245)
                      +.+.+--.+
T Consensus       181 cI~ivh~~L  189 (194)
T d2qmma1         181 CVVIAHHHL  189 (194)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
T ss_conf             696999988

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: AF1056-like
domain: Uncharacterized protein AF1056
species: Archaeoglobus fulgidus [TaxId: 2234]