BLAST/PSIBLAST alignment of GI: 254781160 and GI: 49473945 at iteration 1
>gi|49473945|ref|YP_031987.1| hypothetical protein BQ02980 [Bartonella quintana str. Toulouse] Length = 244
>gi|49239448|emb|CAF25798.1| hypothetical protein BQ02980 [Bartonella quintana str. Toulouse] Length = 244
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 1 MKIHSHLKRLFVDFPLCIKTQGKASGDQYHYLAHVLRMKEGDNILLFNGKDGEWLSKISY 60
M I+ LKRLF+ PL + + K G + YL HVLRM+EG ILLFNG+DGEWL+K+
Sbjct: 1 MHINYKLKRLFIRQPLVLNEEIKIEGQKASYLIHVLRMQEGAEILLFNGQDGEWLAKLIT 60
Query: 61 VGKS-IRFKVEYQSRSQTKQSDVQYIFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQN 119
+ K + K+ +Q R QT S++ Y F+P+K RLDYM+QK+VEMG+ ++PVIT +TQ
Sbjct: 61 IKKRFVVVKLIHQERLQTAPSNLIYCFAPLKNARLDYMVQKAVEMGVSILQPVITHHTQV 120
Query: 120 THYNMDRVRTYTISAAEQCDILTLPFIYPPTTLEFLLKNWDHNCQIVFADETCGSENSLE 179
T N R+ + A+EQC IL+LP P +L LL WD + F DE N L
Sbjct: 121 TRINRTRMEANVVEASEQCGILSLPECVPAVSLVELLACWDETQPLFFCDEAHKLHNPLP 180
Query: 180 --KLHAIAHIPNVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDTAAVAAMALV 237
K H + +P V LIGPEGG+ EE+ L FV P+ LGPRILR+DTAAV A+AL+
Sbjct: 181 LLKKHEMT-VPGV--LIGPEGGFSKEERSFLKKHSFVIPIPLGPRILRADTAAVVALALL 237
Query: 238 QAICGDW 244
A GDW
Sbjct: 238 NATVGDW 244