RPSBLAST alignment of GI: 254781160 and protein with PDBid: 1vhk

>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5 Length = 268
 Score =  158 bits (399), Expect = 1e-39
 Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 20/257 (7%)

Query: 7   LKRLFVDF---PLCIKTQGKASGDQYHYLAHVLRMKEGDNILLFNGKDGEWLSKISYV-- 61
           L+R F++     +        +G++ H++ +V+RM EGD I+  +    E   ++  V  
Sbjct: 3   LQRYFIELTKQQIEEAPTFSITGEEVHHIVNVMRMNEGDQIICCSQDGFEAKCELQSVSK 62

Query: 62  GKSIRFKVEYQSRSQTKQSDVQYIFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQNTH 121
            K     +E+ + ++     V       K ++L+++IQK  E+G  A  P     +    
Sbjct: 63  DKVSCLVIEWTNENRELPIKVYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKL 122

Query: 122 YNM------DRVRTYTISAAEQCDILTLPFIYPPTTLEFLLKNWDHNCQIVFADETCGSE 175
            +       +R       AAEQ     +P +    + + LL+      + V A E    +
Sbjct: 123 DDKKAKKKRERWTKIAKEAAEQSYRNEVPRVMDVHSFQQLLQRMQDFDKCVVAYEESSKQ 182

Query: 176 NSLEKLHAIAHIP----NVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDTAAV 231
             +    AI        ++ I+ GPEGG    E E L     V    LGPRILR++TA +
Sbjct: 183 GEISAFSAIVSSLPKGSSLLIVFGPEGGLTEAEVERLTEQDGV-TCGLGPRILRTETAPL 241

Query: 232 AAMALVQAI----CGDW 244
            A++ +        GD 
Sbjct: 242 YALSAISYQTELLRGDQ 258