HHsearch alignment for GI: 254781161 and conserved domain: COG2170
>COG2170 Uncharacterized conserved protein [Function unknown].
Probab=100.00 E-value=0 Score=329.48 Aligned_cols=350 Identities=18% Similarity=0.230 Sum_probs=271.2
Q ss_pred CCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCCCCEEEECCHHHH
Q ss_conf 35586777653874765784871122349999997555248864612784102334568870341354202420110101
Q gi|254781161|r 30 EFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPGGQLELSTTTLQN 109 (457)
Q Consensus 30 ~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~~qlE~s~~~~~~ 109 (457)
T Consensus 2 ~ltlGvE~E~~lvd~~g~dl~~-----~s~~ii~~~~~~-~~~~~--------~~~e~--------~e~~vE~~t~vc~~ 59 (369)
T COG2170 2 RLTLGVELEFQLVDPQGYDLVG-----SSDAIIEALKGK-VTAGH--------LKHEI--------TESTVELATGVCRL 59 (369)
T ss_pred CCCCCEEEEEEECCCCCCCCCC-----CCHHHHHHCCCC-CCCCC--------HHHHH--------HHHHHCCCCHHHHH
T ss_conf 9665337999960777766645-----417899853788-88751--------16888--------87743034036665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 56778888887888787421038734210568788845420000013566666543211267888763134047514789
Q gi|254781161|r 110 VHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVSLDFSS 189 (457)
Q Consensus 110 ~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~id~~~ 189 (457)
T Consensus 60 ~~eA~~~~r~~r~~l~q~a~d~gL~~~~~GtHPfadw~~~~~~~~prY~~~ie~~~y~~~---q~--~v~G~HVHVGi~~ 134 (369)
T COG2170 60 LAEAAAQLRALRDYLVQAASDHGLRICGGGTHPFADWRRQEVPDNPRYQRLIERTGYLGR---QM--TVAGQHVHVGIPS 134 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH---HE--EEEEEEEEECCCC
T ss_conf 999999999999999997442380332367885025565247887239999998516776---21--5645778836898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEC
Q ss_conf 88999999999876567888743786558877874322688852027778865654457754199999998514531630
Q gi|254781161|r 190 EHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIPMYFIL 269 (457)
Q Consensus 190 ~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~~i~~~ 269 (457)
T Consensus 135 ~d~~~~~l~~l~~~~PhlLALSASSPf~~G~dTGyAS~R~~if~~~P~~g~---pp~f~sw~~f~~~~~~~~~tG~I~~~ 211 (369)
T COG2170 135 PDDAMYLLHRLLRYVPHLLALSASSPFWQGTDTGYASARANIFSQLPTNGL---PPAFQSWAAFEAFFRDQLETGTIDSM 211 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 899999999887650588765037853167323135655766320776799---96516889999999998873641446
Q ss_pred CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC-CCEEECCCCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 5875326678887885126432101365546677531123456643335-501211578888-66755558889887653
Q gi|254781161|r 270 RKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLR-NCLEMRGADSGR-LENIFAVAAFWTGILYD 347 (457)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~-~~IEiR~~Ds~P-~~~~~a~aAf~~gl~~~ 347 (457)
T Consensus 212 --------------------------------~~lwwdIR----Ps-ph~gTlEvRi~D~~~~l~~~~aivaL~~Alv~~ 254 (369)
T COG2170 212 --------------------------------GDLWWDIR----PS-PHLGTLEVRICDTVLNLAELLAIVALIHALVVW 254 (369)
T ss_pred --------------------------------CCEEEECC----CC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf --------------------------------63378613----68-877825888447879999999999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 8854432320236999999999999976311586688------3089999999999999898523124556458899999
Q gi|254781161|r 348 SSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRG------QSLKDIAIQILTFAHQGLKNRSAKNHLQEDETIFLKP 421 (457)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~yL~~ 421 (457)
T Consensus 255 ll~~~d~~p~~p~~l~~~~~eN~wqA~RyGlda~~~~~~dg~~~~~~d~~~~~~~~l~p~A~~l--------g~~~~l~~ 326 (369)
T COG2170 255 LLRRRDADPTEPDYLLYLFDENKWQAARYGLDAVITDPADGRRRALTDWLLRLLQRLAPSAKKL--------GCACALEA 326 (369)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHH--------CCHHHHHH
T ss_conf 9638899989812789987660899987066648962367861237789999999977888762--------51667999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 9999983898589999987102218889998876
Q gi|254781161|r 422 LEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEY 455 (457)
Q Consensus 422 l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~ 455 (457)
T Consensus 327 l~~il~~g-~~aqq~~R~~~~~~~~~~~~v~~~~ 359 (369)
T COG2170 327 LRDILREG-SSAQQQLRVFKQHGGSLIAAVDRHC 359 (369)
T ss_pred HHHHHHHC-CHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 99999853-0799999999802530899999999