Query gi|254781161|ref|YP_003065574.1| glutamate--cysteine ligase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 457
No_of_seqs 156 out of 980
Neff 8.6
Searched_HMMs 33803
Date Wed Jun 1 23:29:11 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781161.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2gwd_A Glutamate cysteine lig 100.0 0 0 485.2 35.9 417 1-429 5-421 (422)
2 >1r8g_A Hypothetical protein Y 100.0 0 0 409.3 25.7 354 23-455 4-365 (372)
3 >1va6_A Glutamate--cysteine li 99.4 8.4E-13 2.5E-17 96.1 9.8 156 30-217 3-170 (254)
4 >3ig5_A Glutamate-cysteine lig 99.1 1.4E-08 4.1E-13 70.5 14.9 216 176-438 221-470 (546)
5 >1f52_A Glutamine synthetase; 98.0 0.0011 3.3E-08 40.6 16.4 91 93-215 113-218 (301)
6 >2ojw_A Glutamine synthetase; 97.9 0.00096 2.8E-08 41.0 14.0 93 29-138 18-130 (256)
7 >2d3a_A Glutamine synthetase; 97.7 0.001 3.1E-08 40.8 11.7 92 30-138 19-131 (252)
8 >3fky_A Glutamine synthetase; 97.7 0.0021 6.1E-08 39.0 13.1 92 30-138 19-130 (264)
9 >2bvc_A Glutamine synthetase 1 97.1 0.018 5.3E-07 33.3 17.3 87 97-215 117-218 (302)
10 >1r8g_A Hypothetical protein Y 89.6 0.16 4.6E-06 27.6 1.6 75 306-380 250-324 (372)
11 >2j9i_A Glutamate-ammonia liga 68.8 2.6 7.6E-05 20.2 1.7 48 91-138 43-91 (95)
12 >1qf6_A THRRS, threonyl-tRNA s 34.4 7 0.00021 17.5 -0.7 45 13-58 1-47 (81)
13 >1swv_A Phosphonoacetaldehyde 33.3 23 0.00068 14.4 1.8 36 419-455 35-71 (84)
14 >3iru_A Phoshonoacetaldehyde h 25.4 26 0.00077 14.1 0.9 36 419-455 36-72 (86)
No 1
>>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, redox regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A* (A:1-422)
Probab=100.00 E-value=0 Score=485.20 Aligned_cols=417 Identities=46% Similarity=0.844 Sum_probs=393.3
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCE
Q ss_conf 98774331121489999999983798720355867776538747657848711223499999975552488646127841
Q gi|254781161|r 1 MTCNPLANTIVTSIDDLVQHIASGIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNI 80 (457)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~ 80 (457)
|+..-.++.+.+++++|+++|++|+|+.+++++|+|+|+++||.++..++++.+ +..+|+.|...++++++...+..
T Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~GiE~E~~~Vd~~~~~~~~~~~---~~~~l~~L~~~~~~~~~~~~~~~ 81 (422)
T 2gwd_A 5 PTEEAVVATEPLTREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTLRPMKYDQ---IAELLNSIAERFEWEKVMEGDKI 81 (422)
T ss_dssp ---------CCCCHHHHHHHHHTTCCCGGGCCEEEEEEEEEEETTTCCBCCHHH---HHHHHHHHHHHHTCEEEEETTEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCHHH---HHHHHHHHHHHCCCCEECCCCCE
T ss_conf 877655568988999999999837888456758986661466679897798377---99999999987398531368855
Q ss_pred ECCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHH
Q ss_conf 02334568870341354202420110101567788888878887874210387342105687888454200000135666
Q gi|254781161|r 81 IGLANPLSKAGISIEPGGQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLM 160 (457)
Q Consensus 81 ~~l~~~~~~~~it~ep~~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m 160 (457)
+.+.. +....+.++.+|+|++++|+.++.++++++..++..+..++...|..++++|+||+..+.+..++++.||+.|
T Consensus 82 ~~~~~--~~~~~~e~~~~qiE~~t~p~~~~~~l~~~l~~~~~~l~~~~~~~g~~l~~~g~~P~~~~~~~~~~~~~ry~~l 159 (422)
T 2gwd_A 82 IGLKQ--GKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTMPKGRYDIM 159 (422)
T ss_dssp EEEEE--TTEEEEECTTCCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCCSCHHHHHH
T ss_pred EEECC--CCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 54337--9964512799668971567688999999999999999999986381011355344567444655567216789
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf 66543211267888763134047514789889999999998765678887437865588778743226888520277788
Q gi|254781161|r 161 KKYMPQVGTHGLDMMFRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRT 240 (457)
Q Consensus 161 ~~~~~~~g~~~~~mm~~tas~Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~ 240 (457)
..++..++..+..||.++|++|||+++.+++++++++|.+..+.|+++||||||||+.|+.+|+.|+|..+|++++..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~qv~~~~~~~~~~~~~~~~~~~~~p~l~aL~anSP~~~G~~~~~~s~R~~~~~~~d~~~~ 239 (422)
T 2gwd_A 160 RNYMPKVGSLGLDMMLRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFLSMRSHIWTDTDKDRT 239 (422)
T ss_dssp HHHGGGTCSSHHHHHHHBCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHCCBCEETTEECSCSBHHHHHTTSSCGGGC
T ss_pred HHHHHHHCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 99998505644034530022054268886788999999999987799999855865357887505488999873443345
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 65654457754199999998514531630587532667888788512643210136554667753112345664333550
Q gi|254781161|r 241 EILPFILRDNSNFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNC 320 (457)
Q Consensus 241 ~~~~~~~~~~~~~e~y~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~ 320 (457)
+..+..+.++.+|++|++++++++.++...+..+.......+.+++..... ....+.++..+|..|+++.|+++|+|+|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~st~~~~~r~~~~ 318 (422)
T 2gwd_A 240 GMLPFVFDDSFGFEQYVDYALDVPMYFAYRNGKYVDCTGMTFRQFLAGKLP-CLPGELPTYNDWENHLTTIFPEVRLKRY 318 (422)
T ss_dssp SCCGGGGSTTCSHHHHHHHHHHSCEEEEEETTEEEEEEEECHHHHHTTCCT-TSTTCCCCHHHHHHHHTTCCCSEEESSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHCCCCCC-CCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 554334787755899999986054212126766204688657764045665-5566541588998642035764343450
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 12115788886675555888988765388544323202369999999999999763115866883089999999999999
Q gi|254781161|r 321 LEMRGADSGRLENIFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRGQSLKDIAIQILTFAHQ 400 (457)
Q Consensus 321 IEiR~~Ds~P~~~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~~~~~~l~~~ll~~A~~ 400 (457)
||+|++|+||.+...+.+|++.+|++....+......++.++++.+.+|+++|+|+|+++.+.++++++++.++++++++
T Consensus 319 IE~R~~D~~p~~~~~a~~a~~~~ll~~~~~~~~~~~~~~~~~~~~~~~n~~~a~r~Gl~a~~~~~~~~~~~~~ll~~~~~ 398 (422)
T 2gwd_A 319 MEMRGADGGPWRRLCALPAFWVGLLYDEDVLQSVLDLTADWTPAEREMLRNKVPVTGLKTPFRDGLLKHVAEDVLKLAKD 398 (422)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHHHSSHHHHHHHHHHTTTCCHHHHHHHHHHHHHHGGGSEETTEEHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 13402346871110366067788774068777677665002699999999999985307876886499999999999999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 89852312455645889999999999838
Q gi|254781161|r 401 GLKNRSAKNHLQEDETIFLKPLEKIIHNN 429 (457)
Q Consensus 401 GL~~r~~~~~~~~dE~~yL~~l~~~i~~g 429 (457)
||+.+|. +|+.||++|++++++|
T Consensus 399 ~l~~~g~------~~~~~l~~l~~~l~~G 421 (422)
T 2gwd_A 399 GLERRGY------KEVGFLNAVTEVVRTG 421 (422)
T ss_dssp HHHHHTS------CCGGGGHHHHHHHHHT
T ss_pred HHHHCCC------CHHHHHHHHHHHHHCC
T ss_conf 9998399------7599999999999849
No 2
>>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} (A:)
Probab=100.00 E-value=0 Score=409.33 Aligned_cols=354 Identities=14% Similarity=0.121 Sum_probs=307.0
Q ss_pred HCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCC-CCEE
Q ss_conf 379872035586777653874765784871122349999997555248864612784102334568870341354-2024
Q gi|254781161|r 23 SGIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPG-GQLE 101 (457)
Q Consensus 23 ~g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE 101 (457)
+..|+++.++||+|+|+++||+++..++++. ..+|+++.+. ..+..|+.|++ +|||
T Consensus 4 ~~f~~~~~~~~GiE~E~~~Vd~~~~~~~~~~-----~~ll~~l~~~------------------~~~~~i~~E~~~~~iE 60 (372)
T 1r8g_A 4 PDFHVSEPFTLGIELEXQVVNPPGYDLSQDS-----SXLIDAVKNK------------------ITAGEVKHDITESXLE 60 (372)
T ss_dssp CCCCCCCTTCEEEEEEEEEEETTTTEECSCC-----HHHHTTTSSS------------------CSSSEEEECSSSSEEE
T ss_pred CCCCCCCCCCEEEEEEEEEECCCCCCCCCCH-----HHHHHHHHCC------------------CCCCCCCCCCCCCEEE
T ss_conf 8789999983488876632679987767756-----9999973232------------------4688611037773699
Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 20110101567788888878887874210387342105687888454200000135666665432112678887631340
Q gi|254781161|r 102 LSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTT 181 (457)
Q Consensus 102 ~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~ 181 (457)
++++|+.++.++.+++...+..+..++..+|..++++|+||+..+.+..++|++||+.|..+++..+. |..+||+
T Consensus 61 l~t~p~~~~~~~~~~l~~~~~~l~~~~~~~g~~l~~~g~~P~~~~~~~~~~~~~rY~~~~~~~~~~~~-----~~~~~g~ 135 (372)
T 1r8g_A 61 LATDVCRDINQAAGQFSAXQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQ-----QATVFGQ 135 (372)
T ss_dssp EECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGC-----SCCBCEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHH-----HHHHCCC
T ss_conf 74878799999999999999999998765166124357897898321346760789999986052887-----7400152
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 47514789889999999998765678887437865588778743226888520277788656544577541999999985
Q gi|254781161|r 182 QVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWAL 261 (457)
Q Consensus 182 Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~ 261 (457)
||||++++++++++++|.++.+.|+++|||+|||||+|+++|+.|+|..+|+.+++.+++. .|+++..|++|+++++
T Consensus 136 hvn~~~~~~~~~~~~~~~~~~~~p~l~aL~anSP~~~G~~tg~~S~R~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 212 (372)
T 1r8g_A 136 HVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYXQGTDTRFASSRPNIFSAFPDNGPXP---WVSNWQQFEALFRCLS 212 (372)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTHHHHHHHHCCBCEETTEECSCSBCGGGGGTTSTTCSSCC---CCSSHHHHHHHHHHHT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHHH
T ss_conf 4755889999999999999999899999863890005998854310578872186768875---4566377899999875
Q ss_pred HCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-HHHHHHHHHH
Q ss_conf 145316305875326678887885126432101365546677531123456643335501211578888-6675555888
Q gi|254781161|r 262 DIPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGR-LENIFAVAAF 340 (457)
Q Consensus 262 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P-~~~~~a~aAf 340 (457)
+.+.++...+ .|++.+ +.+.++|||+|++|++| ..+.++.++|
T Consensus 213 ~~~~~~~~~~-------------------------------~~~~vr-----~~~~~~~iE~R~~D~~p~~~~~~~~~af 256 (372)
T 1r8g_A 213 YTTXIDSIKD-------------------------------LHWDIR-----PSPHFGTVEVRVXDTPLTLSHAVNXAGL 256 (372)
T ss_dssp TSSSCSSGGG-------------------------------CCCSEE-----EETTTTEEEEEEEECCSSHHHHHHHHHH
T ss_pred HCCEECCCCC-------------------------------EEEECC-----CCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 2460113554-------------------------------122057-----7766664533467899988999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC------CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 9887653885443232023699999999999997631158668------8308999999999999989852312455645
Q gi|254781161|r 341 WTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVR------GQSLKDIAIQILTFAHQGLKNRSAKNHLQED 414 (457)
Q Consensus 341 ~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~------~~~~~~l~~~ll~~A~~GL~~r~~~~~~~~d 414 (457)
+.+++.... ..........+.+.+..|+|+|+++|+++.+. ..++.++++++++.+++||..+ +
T Consensus 257 ~~~l~~~~~--~~~~~~~~~~~~~~~~~n~~~a~~~g~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~ 326 (372)
T 1r8g_A 257 IQATAHWLL--TERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKI--------G 326 (372)
T ss_dssp HHHHHHHHH--HHCCCCCCGGGGTTHHHHHHHHHHHGGGSEEECTTTCCEEEHHHHHHHHHHHSHHHHHHH--------T
T ss_pred HHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHC--------C
T ss_conf 999999998--715778524559999999999998383332132679987489999999999999999988--------7
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 88999999999983898589999987102218889998876
Q gi|254781161|r 415 ETIFLKPLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEY 455 (457)
Q Consensus 415 E~~yL~~l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~ 455 (457)
+..||+++.+++..|.|+|+++++.|++. +++..++.++
T Consensus 327 ~~~~L~~l~~~~~~~~t~A~r~~~~~~~~--g~~~~~~~~~ 365 (372)
T 1r8g_A 327 ASSAIEALHRQVVSGLNEAQLXRDFVADG--GSLIGLVKKH 365 (372)
T ss_dssp CHHHHHHHHHHHHHCCCHHHHHHHHHHTT--CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHCC--CCHHHHHHHH
T ss_conf 98999999999984999999999999839--9999999999
No 3
>>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} (A:19-156,A:243-337,A:461-481)
Probab=99.44 E-value=8.4e-13 Score=96.12 Aligned_cols=156 Identities=13% Similarity=0.004 Sum_probs=110.8
Q ss_pred CCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCC-CCEEEECCHHH
Q ss_conf 35586777653874765784871122349999997555248864612784102334568870341354-20242011010
Q gi|254781161|r 30 EFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPG-GQLELSTTTLQ 108 (457)
Q Consensus 30 ~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~~~~~ 108 (457)
.+++|+|.|+++||.++..+++... ++|. .......|+-|-. +|+|+.++||.
T Consensus 3 ~~t~GIE~E~llVD~~g~~a~~~hp-----~~Lg---------------------sal~~p~IttElses~LEi~Tpp~~ 56 (254)
T 1va6_A 3 GIQRGLERETLRVNADGTLATTGHP-----EALG---------------------SALTHKWITTDFAEALLEFITPVDG 56 (254)
T ss_dssp TCEEEEEEEEEEECTTSCBCCSCSC-----GGGC---------------------CTTTCSSEEECSBTTEEEEECCCBS
T ss_pred CCCCCEEEEHHEECCCCCCCCCCCC-----HHHC---------------------CCCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 5874644101026889784699997-----4338---------------------7531779887557887773789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC-------CCCCHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 156778888887888787421038734210568-------7888454200-00013566666543211267888763134
Q gi|254781161|r 109 NVHQIKGEILGYIQILKEITQNLDLGILGMGFN-------PKWKLDEMPI-MPKSRYVLMKKYMPQVGTHGLDMMFRTCT 180 (457)
Q Consensus 109 ~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~-------P~~~~~~~~~-~~~~Ry~~m~~~~~~~g~~~~~mm~~tas 180 (457)
++.++..++...+..+...+...++..+++|+| |++.|..... ..+.||+.+..+ .....|..+||
T Consensus 57 ~~~e~l~~L~~l~~~v~~~a~~e~lw~~Smg~~l~~~~~iP~A~~g~sn~~~~k~rYR~~l~~------ryg~~~q~I~G 130 (254)
T 1va6_A 57 DIEHMLTFMRDLHRYTARNMGDERMWPLSMPSYIAEGQDIELAQYGTSNTGRFKTLYREGLKN------RYGALMQTISG 130 (254)
T ss_dssp CHHHHHHHHHHHHHHHHTSSTTCEECCSSSCSSCCTTCCCCBCCCCSSHHHHHHHHHHHHHHH------HHCHHHHTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH------HHCHHHHCCCC
T ss_conf 999999999999999996088753267788988887366662016875431589999999999------71504421011
Q ss_pred CEEEECCCCHH--HH-HHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 04751478988--99-999999987656788874378655
Q gi|254781161|r 181 TQVSLDFSSEH--DM-ATKLRVSFKLQPLATAIFASSPFA 217 (457)
Q Consensus 181 ~Qv~id~~~~~--d~-~~~~n~a~~l~P~llAL~aNSPf~ 217 (457)
+||||.+++.. ++ +.+-++-..+..+--|+..-||-+
T Consensus 131 vHvhvsvp~~~q~~~~~~~n~l~~y~~~l~~a~~~~~~~y 170 (254)
T 1va6_A 131 VHYNFSLPNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEY 170 (254)
T ss_dssp EEEEEECCCGGGTTSCCCSSCHHHHHHHHHHHHTCBCHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
T ss_conf 2332457766433344422221888999999975984268
No 4
>>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* (A:42-340,A:446-692)
Probab=99.06 E-value=1.4e-08 Score=70.47 Aligned_cols=216 Identities=13% Similarity=0.013 Sum_probs=120.7
Q ss_pred HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC-CCCCCCHH
Q ss_conf 63134047514789889999999998765678887437865588778743226888520277788656544-57754199
Q gi|254781161|r 176 FRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFI-LRDNSNFE 254 (457)
Q Consensus 176 ~~tas~Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~-~~~~~~~e 254 (457)
+..|++||.++..+.+++-.+|-.+..+.|+++||+|.|||+.|.....-.+=..+-+.+|.......... ..+..
T Consensus 221 MG~cCLQvTfQa~ni~eAR~LYDqL~~l~Pi~LALsAAtP~~kG~L~d~D~r~~~l~~~~d~r~~~E~g~~pl~~~~--- 297 (546)
T 3ig5_A 221 MGCSCLQVTFQAPNINKARYLYDALVNFAPIMLAFSAAAPAFKGWLADQDVRWNVISGAVDDRTPKERGVAPLLPKY--- 297 (546)
T ss_dssp HTSCBEEEEEEESSHHHHHHHHHHHTTHHHHHHHHTCCCCEETTEEBSBCCSHHHHHHHTCCCCTTTTTSCCSSTTT---
T ss_pred CCCCEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCC---
T ss_conf 65412577642046488788776531212888887641675527323654316877643304887762766565422---
Q ss_pred HHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHH-H
Q ss_conf 999998514531630587532667888788512643210136554667753112345664333550121157888866-7
Q gi|254781161|r 255 HYAQWALDIPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGRLE-N 333 (457)
Q Consensus 255 ~y~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P~~-~ 333 (457)
+.+...+.+.+. + .-++ -. ...-=|||+|+++.|..+ +
T Consensus 298 ----------------~~QtvRFKPPp~----~-s~p~-----------~~---------~~iGWRVEFRpmEiQlTDFE 336 (546)
T 3ig5_A 298 ----------------NKQTLRFKPPTQ----Q-ATPD-----------KK---------DSPGWRVEFRPFEVQLLDFE 336 (546)
T ss_dssp ----------------SGCSEEEECCCT----T-CCTT-----------CT---------TSCCEEEEECCCBCCSSHHH
T ss_pred ----------------CCCCCCCCCCCC----C-CCCC-----------CC---------CCCCCEEEEECCCCCCCHHH
T ss_conf ----------------333001168986----6-7777-----------77---------89885456535552366366
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHH--CCCC--------------CCCCHHHHHH----
Q ss_conf 5555888988765388544323-20236999999999999976311--5866--------------8830899999----
Q gi|254781161|r 334 IFAVAAFWTGILYDSSALQNAD-HLTSSWSFYDINKLNNTVPSKGM--RSTV--------------RGQSLKDIAI---- 392 (457)
Q Consensus 334 ~~a~aAf~~gl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~aar~Gl--~a~~--------------~~~~~~~l~~---- 392 (457)
.+|.+.|+..|....- ... ++---++-..+.+|..+|.+..= +.++ ..-++.+++.
T Consensus 337 NAAf~vFivLLtraIL---s~~~~LNfYIPiSkVdENM~~AhkrdAv~~~kF~fR~~~~~~~~~~~eemTi~EI~nG~~~ 413 (546)
T 3ig5_A 337 NAAYSVLIYLIVDSIL---TFSDNINAYIHMSKVWENMKIAHHRDAILFEKFHWKKSFRNDTDVETEDYSISEIFHNPEN 413 (546)
T ss_dssp HHHHHHHHHHHHHHHH---HTTTTCCCCCCHHHHHHHHHHTTBTTHHHHCEEEEESCSSCSSCCCEEEEEHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHH---HCCCCCCEEEEHHHHHHHHHHHHHHCHHHHCEEEEECCCCCCCCCCHHHCCHHHHHCCCCC
T ss_conf 7799999999999999---5454545443111667788999743445405257633677787630433448874158877
Q ss_pred ----HHHHHHHHHHHHCCCCC------CCCCCHHHHHHHHHHHHHCC-CCCHHHHHH
Q ss_conf ----99999999898523124------55645889999999999838-985899999
Q gi|254781161|r 393 ----QILTFAHQGLKNRSAKN------HLQEDETIFLKPLEKIIHNN-QTTADEMLA 438 (457)
Q Consensus 393 ----~ll~~A~~GL~~r~~~~------~~~~dE~~yL~~l~~~i~~g-~t~A~~~l~ 438 (457)
-|+++.+.=|....+.. ........||+-|..|+.-. .|.|.|+++
T Consensus 414 g~FpGli~lv~~yl~~~~~d~~~~~~~~t~~~l~~YL~lIs~RAsG~l~T~A~wiR~ 470 (546)
T 3ig5_A 414 GIFPQFVTPILCQKGFVTKDWKELKHSSKHERLYYYLKLISDRASGELPTTAKFFRN 470 (546)
T ss_dssp CHHHHTHHHHHHHTTSCSSCGGGGGGCSSCHHHHHHHHHHHHHHTTSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 778741368987342431011124550278899999999998706877857899999
No 5
>>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} (A:99-399)
Probab=97.97 E-value=0.0011 Score=40.64 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=57.7
Q ss_pred EEC-CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 413-5420242011010156778888887888787421038734210568788845420000013566666543211267
Q gi|254781161|r 93 SIE-PGGQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHG 171 (457)
Q Consensus 93 t~e-p~~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~ 171 (457)
.-| ..+|.|+...+...+.. +.....++..++.++.++|+....+ |.... ...
T Consensus 113 h~E~~~gQ~Ei~~~~~~~l~a-AD~~~~~r~~ik~vA~~~G~~atFm---pKP~~------------------~~~---- 166 (301)
T 1f52_A 113 HEVATAGQNEVATRFNTMTKK-ADEIQIYKYVVHNVAHRFGKTATFM---PKPMF------------------GDN---- 166 (301)
T ss_dssp ECSSTTTEEEEEECCEEHHHH-HHHHHHHHHHHHHHHHHTTCEEECC---SCSST------------------TSC----
T ss_pred ECCCCCCCEEEECCCCCHHHH-HHHHHHHHHHHHHHHHHHCCEEEEC---CCCCC------------------CCC----
T ss_conf 022367877995067878888-9999999999999999849878971---66679------------------999----
Q ss_pred HHHHHHHCCCEEEECCCCHH--------------HHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 88876313404751478988--------------999999999876567888743786
Q gi|254781161|r 172 LDMMFRTCTTQVSLDFSSEH--------------DMATKLRVSFKLQPLATAIFASSP 215 (457)
Q Consensus 172 ~~mm~~tas~Qv~id~~~~~--------------d~~~~~n~a~~l~P~llAL~aNSP 215 (457)
.+|.|+|+.+.+.. .+-..+--....+|.+.++++-++
T Consensus 167 ------Gsg~H~h~Sl~~~~~n~~~~~~~~~lS~~~~~fiaGil~h~~~l~a~~~pt~ 218 (301)
T 1f52_A 167 ------GSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTT 218 (301)
T ss_dssp ------CCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSG
T ss_pred ------CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf ------6614799724569986677777655229999999999999999776437998
No 6
>>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural genomics, structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A (A:129-384)
Probab=97.90 E-value=0.00096 Score=41.02 Aligned_cols=93 Identities=17% Similarity=0.104 Sum_probs=58.9
Q ss_pred CCCEEEEEEEEEEEECCCCC--------CCC------HH--HHHHHHHHHHHHHH---HCCCCEEECCCCEECCCCCCCC
Q ss_conf 03558677765387476578--------487------11--22349999997555---2488646127841023345688
Q gi|254781161|r 29 EEFRIGTEHESFIFSRADHR--------PLP------YD--GEKSIVTILQAIQK---KLAWKEIMDKGNIIGLANPLSK 89 (457)
Q Consensus 29 ~~~~IG~E~E~flvd~~~~~--------p~~------~~--~~~~i~~~L~~l~~---~~~~~~~~~~~~~~~l~~~~~~ 89 (457)
-.+++|+|+|+|+++..... +.+ |. .......+++++.+ ..|.+.
T Consensus 18 ~g~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~i---------------- 81 (256)
T 2ojw_A 18 QHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKI---------------- 81 (256)
T ss_dssp GCCEEEEEEEEEEEC-CCSBTTCCTTSCCSCSSSCTTCCSTTTCCCHHHHHHHHHHHHHHTCCE----------------
T ss_pred CCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE----------------
T ss_conf 2743300004799853566667766788887766444665202465899999999875305311----------------
Q ss_pred CCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
Q ss_conf 70341354-20242011010156778888887888787421038734210
Q gi|254781161|r 90 AGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM 138 (457)
Q Consensus 90 ~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~ 138 (457)
..+.-|-+ ||.|+...+...+.. +..+..++..+..++.++|+....+
T Consensus 82 e~~h~E~g~gQ~Ei~~~~~~~l~a-aD~~~~~r~~ik~vA~~~gl~atFm 130 (256)
T 2ojw_A 82 AGTNAEVMPAQWEFQIGPCEGISM-GDHLWVARFILHRVCEDFGVIATFD 130 (256)
T ss_dssp EEEEECSSTTEEEEEEEEEETTHH-HHHHHHHHHHHHHHHHHHTCEEECC
T ss_pred EEEECCCCCCEEEEEECCCCCCCC-CCHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 023114577506870023313345-6799999999999999849878862
No 7
>>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* (A:105-356)
Probab=97.71 E-value=0.001 Score=40.80 Aligned_cols=92 Identities=20% Similarity=0.104 Sum_probs=58.0
Q ss_pred CCEEEEEEEEEEEECCCCC--CCCH---------------HHHHHHHHHHHHHHH---HCCCCEEECCCCEECCCCCCCC
Q ss_conf 3558677765387476578--4871---------------122349999997555---2488646127841023345688
Q gi|254781161|r 30 EFRIGTEHESFIFSRADHR--PLPY---------------DGEKSIVTILQAIQK---KLAWKEIMDKGNIIGLANPLSK 89 (457)
Q Consensus 30 ~~~IG~E~E~flvd~~~~~--p~~~---------------~~~~~i~~~L~~l~~---~~~~~~~~~~~~~~~l~~~~~~ 89 (457)
.+.+|+|+|+|+++..... +.++ ........++..+.. ..|.+.
T Consensus 19 ~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~v---------------- 82 (252)
T 2d3a_A 19 EPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINI---------------- 82 (252)
T ss_dssp CCEEEEEEEEEEEETTTCCBTTSCTTSBCSCSSSCTTCCSTTTCCCHHHHHHHHHHHHHHTCCE----------------
T ss_pred CEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC----------------
T ss_conf 0676141389985135678887654578754467545543100133678999998776316453----------------
Q ss_pred CCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
Q ss_conf 70341354-20242011010156778888887888787421038734210
Q gi|254781161|r 90 AGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM 138 (457)
Q Consensus 90 ~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~ 138 (457)
..+.-|.+ ||.|+...+...+.-+ .....++..++.++.++|+....+
T Consensus 83 ~~~~~E~g~gQ~Ei~l~~~~~l~aa-D~~~~~r~~ik~vA~~hgl~atFm 131 (252)
T 2d3a_A 83 SGINGEVMPGQWEFQVGPSVGISSG-DQVWVARYILERITEIAGVVVTFD 131 (252)
T ss_dssp EEEEECSSTTEEEEEEEEEETHHHH-HHHHHHHHHHHHHHHHHTEEEECC
T ss_pred CCCCCCCCCCCEEEEEECCCHHCCC-HHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 4222366886379986214100121-489999999999999829889962
No 8
>>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} (A:107-370)
Probab=97.71 E-value=0.0021 Score=39.00 Aligned_cols=92 Identities=18% Similarity=0.209 Sum_probs=57.8
Q ss_pred CCEEEEEEEEEEEECCCCC--------CCC------H--HHHHHHHHHHHHHHH---HCCCCEEECCCCEECCCCCCCCC
Q ss_conf 3558677765387476578--------487------1--122349999997555---24886461278410233456887
Q gi|254781161|r 30 EFRIGTEHESFIFSRADHR--------PLP------Y--DGEKSIVTILQAIQK---KLAWKEIMDKGNIIGLANPLSKA 90 (457)
Q Consensus 30 ~~~IG~E~E~flvd~~~~~--------p~~------~--~~~~~i~~~L~~l~~---~~~~~~~~~~~~~~~l~~~~~~~ 90 (457)
.+.+|+|+|+|+++..... +.+ | ........+++++.. ..|.+. .
T Consensus 19 ~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~v----------------e 82 (264)
T 3fky_A 19 EIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEI----------------S 82 (264)
T ss_dssp CCEEEEEEEEEEECTTSSBTTCCTTSBCSCSSSCTTCCSTTTCSCHHHHHHHHHHHHHHTCCE----------------E
T ss_pred CCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC----------------E
T ss_conf 746714413898977887545777676676532012357775103579999999987424542----------------0
Q ss_pred CEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
Q ss_conf 0341354-20242011010156778888887888787421038734210
Q gi|254781161|r 91 GISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM 138 (457)
Q Consensus 91 ~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~ 138 (457)
.+.-|.+ ||.|+...+...+..+ ......+..+..++.++|+....+
T Consensus 83 ~~h~E~~pgQ~Ei~~~~~~~l~aa-D~~~~~r~~ik~iA~~~g~~atFm 130 (264)
T 3fky_A 83 GINAEVMPSQWEFQVGPCTGIDMG-DQLWMARYFLHRVAEEFGIKISFH 130 (264)
T ss_dssp EEEECSSTTEEEEEEEEEETHHHH-HHHHHHHHHHHHHHHTTTCEEECC
T ss_pred EECCCCCCCEEEEEEECCHHHCCC-CHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 110234554144400001001034-088999999999999819807875
No 9
>>2bvc_A Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis} (A:115-416)
Probab=97.07 E-value=0.018 Score=33.27 Aligned_cols=87 Identities=14% Similarity=0.094 Sum_probs=55.7
Q ss_pred CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42024201101015677888888788878742103873421056878884542000001356666654321126788876
Q gi|254781161|r 97 GGQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMF 176 (457)
Q Consensus 97 ~~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~ 176 (457)
.||.|+...+...+.. +..+..++..++.++.++|+....+.- |+. ...
T Consensus 117 ~gQ~Ei~~~~~~~l~a-aD~~~~~r~~ik~vA~~~G~~atFmpK-P~~--------------------~~~--------- 165 (302)
T 2bvc_A 117 GGQAEINYQFNSLLHA-ADDMQLYKYIIKNTAWQNGKTVTFMPK-PLF--------------------GDN--------- 165 (302)
T ss_dssp TTEEEEEECCEEHHHH-HHHHHHHHHHHHHHHHHTTCEEECCSC-SST--------------------TSC---------
T ss_pred CEEEEECCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCEEEEEEE-ECC--------------------CCC---------
T ss_conf 6334425653400577-748899999999999963964778642-068--------------------988---------
Q ss_pred HHCCCEEEECCCCH---------------HHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 31340475147898---------------8999999999876567888743786
Q gi|254781161|r 177 RTCTTQVSLDFSSE---------------HDMATKLRVSFKLQPLATAIFASSP 215 (457)
Q Consensus 177 ~tas~Qv~id~~~~---------------~d~~~~~n~a~~l~P~llAL~aNSP 215 (457)
..|.|+|+-+.+. +-+-..+--....+|-+.|+++-++
T Consensus 166 -Gsg~H~h~SL~~~~~~~~~~~~~~~~ls~~~~~fiaGll~h~~~l~al~aptv 218 (302)
T 2bvc_A 166 -GSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTV 218 (302)
T ss_dssp -CCCEEEEEEEEETTEECSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCST
T ss_pred -CCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHEEEECCC
T ss_conf -76600788864179886443344333379999999999861633311121465
No 10
>>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} (A:)
Probab=89.57 E-value=0.16 Score=27.57 Aligned_cols=75 Identities=5% Similarity=-0.103 Sum_probs=61.0
Q ss_pred HCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 112345664333550121157888866755558889887653885443232023699999999999997631158
Q gi|254781161|r 306 NHLSTLFPAVRLRNCLEMRGADSGRLENIFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRS 380 (457)
Q Consensus 306 ~~~~~~f~~~r~~~~IEiR~~Ds~P~~~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a 380 (457)
++..+.|+.++.+.++|.|..|++|.+...+..++|.++.+++.+...........+..+........++.|+..
T Consensus 250 ~~~~~af~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~a~~~g~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 324 (372)
T 1r8g_A 250 AVNXAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHK 324 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCGGGGTTHHHHHHHHHHHGGGSEEECTTTCCEEEHHHHHHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999871577852455999999999999838333213267998748999999999999999998
No 11
>>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} (A:128-222)
Probab=68.76 E-value=2.6 Score=20.19 Aligned_cols=48 Identities=8% Similarity=-0.011 Sum_probs=39.5
Q ss_pred CEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
Q ss_conf 0341354-20242011010156778888887888787421038734210
Q gi|254781161|r 91 GISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM 138 (457)
Q Consensus 91 ~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~ 138 (457)
.+.-|-+ ||+|+...+..+.-+++.....++..+..++.++|+....+
T Consensus 43 ~~~~E~g~gQ~Ei~~~~~~~~l~aAD~~~~~r~~vk~vA~~~Gl~aTFm 91 (95)
T 2j9i_A 43 AAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAA 91 (95)
T ss_dssp TTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEECC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 2047663421111223301677888999999999999999869964333
No 12
>>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, zinc, mRNA, aminoacylation, translational regulation, protein/RNA, ligase/RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} (A:225-289,A:520-535)
Probab=34.35 E-value=7 Score=17.54 Aligned_cols=45 Identities=7% Similarity=0.112 Sum_probs=30.9
Q ss_pred CHHHHHHHHHH--CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHH
Q ss_conf 89999999983--79872035586777653874765784871122349
Q gi|254781161|r 13 SIDDLVQHIAS--GIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSI 58 (457)
Q Consensus 13 ~~~~l~~~f~~--g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i 58 (457)
|+++|.+|++- ..|.+...+||-|+++|.++..+ .-.|+-.++|.
T Consensus 1 dk~~L~~yl~~lEEak~RDHRkIGkeL~LF~f~e~g-pG~pfwlP~G~ 47 (81)
T 1qf6_A 1 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA-PGMVFWHNDGW 47 (81)
T ss_dssp SHHHHHHHHHHHHHHHTTCHHHHHHHTTCEECCTTS-TTCCEECHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCHHH
T ss_conf 645589999999998730278999974676120568-51567785099
No 13
>>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} (A:20-103)
Probab=33.35 E-value=23 Score=14.40 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=24.6
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHH-CCCHHHHHHHH
Q ss_conf 99999999838985899999871022-18889998876
Q gi|254781161|r 419 LKPLEKIIHNNQTTADEMLAAYHTRW-GKSIDPCFEEY 455 (457)
Q Consensus 419 L~~l~~~i~~g~t~A~~~l~~y~~~~-~~~i~~i~~~~ 455 (457)
.++|+.+++.- .-++++.++|...| +.||+++|...
T Consensus 35 ~dHIrall~~p-~V~~~W~~~~g~~~te~DV~~iy~~F 71 (84)
T 1swv_A 35 IDHVRALTEMP-RIASEWNRVFRQLPTEADIQEMYEEF 71 (84)
T ss_dssp HHHHHHHHHSH-HHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999986202-44689999856467688899999999
No 14
>>3iru_A Phoshonoacetaldehyde hydolase like protein; phosphonoacetaldehyde hydrolase like protein, structural genomics, PSI-2; 2.30A {Oleispira antarctica} (A:27-112)
Probab=25.44 E-value=26 Score=14.06 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=22.5
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHH-CCCHHHHHHHH
Q ss_conf 99999999838985899999871022-18889998876
Q gi|254781161|r 419 LKPLEKIIHNNQTTADEMLAAYHTRW-GKSIDPCFEEY 455 (457)
Q Consensus 419 L~~l~~~i~~g~t~A~~~l~~y~~~~-~~~i~~i~~~~ 455 (457)
.++|+.+++.- .-++++.++|...| +.||+++|...
T Consensus 36 ~dHIrall~~p-~V~~~W~~~~g~~~~e~DV~~iy~~F 72 (86)
T 3iru_A 36 SEHIRRXLGNS-RIANAWLSIKGQASNEEDIKRLYDLF 72 (86)
T ss_dssp HHHHHHHTTSH-HHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCC-HHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99999985244-03679999762026699999999999
Done!