HHsearch results for GI: 254781161 and protein with PDBid: 1r8g_A
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=100.00 E-value=0 Score=403.91 Aligned_cols=354 Identities=14% Similarity=0.127 Sum_probs=298.8
Q ss_pred CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEEC-CCCCEEE
Q ss_conf 798720355867776538747657848711223499999975552488646127841023345688703413-5420242
Q gi|254781161|r 24 GIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIE-PGGQLEL 102 (457)
Q Consensus 24 g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~e-p~~qlE~ 102 (457)
+.+.++.++||+|+|+|+||+++..+++. +.++|+.+.+.. .+..|+.| +.+|||+
T Consensus 5 ~f~~~~~~tiG~E~E~~lVD~~~~~~~~~-----~~~vl~~~~~~~------------------~~~~i~~El~~~qlEl 61 (372)
T 1r8g_A 5 DFHVSEPFTLGIELEMQVVNPPGYDLSQD-----SSMLIDAVKNKI------------------TAGEVKHDITESMLEL 61 (372)
T ss_dssp CCCCCCTTCEEEEEEEEEEETTTTEECSC-----CHHHHTTTSSSC------------------SSSEEEECSSSSEEEE
T ss_pred CCCCCCCCEEEEEEEEEEECCCCCCCCCC-----HHHHHHHHHCCC------------------CCCCEEECCCCCEEEE
T ss_conf 88999998058887653367998776775-----699999732324------------------7985444278727997
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
Q ss_conf 01101015677888888788878742103873421056878884542000001356666654321126788876313404
Q gi|254781161|r 103 STTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQ 182 (457)
Q Consensus 103 s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Q 182 (457)
+++||.+++++.+++...+..+..++.+.|+.++++|+||+..+.++.+.+++||+.|..+++.. .+|..+||+|
T Consensus 62 ~t~p~~~~~e~~~~l~~~~~~l~~~~~~~g~~l~~~g~~P~~~~~~~~~~~~~ry~~~~~~~~~~-----~~~~~~~g~h 136 (372)
T 1r8g_A 62 ATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYL-----IQQATVFGQH 136 (372)
T ss_dssp ECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGG-----GCSCCBCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH-----HHHCCCCCCE
T ss_conf 37887999999999999999999877436916424678877872102368557899999864515-----5422564754
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 75147898899999999987656788874378655887787432268885202777886565445775419999999851
Q gi|254781161|r 183 VSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALD 262 (457)
Q Consensus 183 v~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~ 262 (457)
|||++.+++++++++|.++.++|+++|||+||||++|+++|+.|+|..+|+.+++.++ +..+.++..|++|++...+
T Consensus 137 vnv~~~~~e~~~~~~~~~~~~~p~llaL~anSP~~~G~~tg~~s~R~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 213 (372)
T 1r8g_A 137 VHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFPDNGP---MPWVSNWQQFEALFRCLSY 213 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTHHHHHHHHCCBCEETTEECSCSBCGGGGGTTSTTCSS---CCCCSSHHHHHHHHHHHTT
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHH
T ss_conf 7637999999999999999998999999618921048888651123335640878788---8533455779999999875
Q ss_pred CCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-HHHHHHHHHHH
Q ss_conf 45316305875326678887885126432101365546677531123456643335501211578888-66755558889
Q gi|254781161|r 263 IPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGR-LENIFAVAAFW 341 (457)
Q Consensus 263 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P-~~~~~a~aAf~ 341 (457)
.+.++... +.|++.++ ...++|||+|++|++| ..+.++.++|+
T Consensus 214 ~~~~~~~~-------------------------------~~~~~~rp-----~~~~~~iE~R~~D~~p~~~~~~a~aa~~ 257 (372)
T 1r8g_A 214 TTMIDSIK-------------------------------DLHWDIRP-----SPHFGTVEVRVMDTPLTLSHAVNMAGLI 257 (372)
T ss_dssp SSSCSSGG-------------------------------GCCCSEEE-----ETTTTEEEEEEEECCSSHHHHHHHHHHH
T ss_pred CCCCCCCC-------------------------------CCEEECCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 47524676-------------------------------42233676-----7777754335689999979999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC------CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 887653885443232023699999999999997631158668------83089999999999999898523124556458
Q gi|254781161|r 342 TGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVR------GQSLKDIAIQILTFAHQGLKNRSAKNHLQEDE 415 (457)
Q Consensus 342 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~------~~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE 415 (457)
.+++..+.. .........++..++.|+|+|+|+|+++.+. ..++.+++.+|++.+++||++.| +
T Consensus 258 ~~l~~~l~~--~~~~~~~~~~~~~~~~n~~~aar~Gl~~~~~~~~~g~~~~~~~~~~~ll~~~~~~l~~lg--------~ 327 (372)
T 1r8g_A 258 QATAHWLLT--ERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIG--------A 327 (372)
T ss_dssp HHHHHHHHH--HCCCCCCGGGGTTHHHHHHHHHHHGGGSEEECTTTCCEEEHHHHHHHHHHHSHHHHHHHT--------C
T ss_pred HHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC--------C
T ss_conf 999999986--069985013289999999999983831203547899686899999999999999999887--------9
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHC
Q ss_conf 89999999999838985899999871022188899988767
Q gi|254781161|r 416 TIFLKPLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEYA 456 (457)
Q Consensus 416 ~~yL~~l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~~ 456 (457)
..||+++++++++|+|+|+|+++.|+.. +++..++.+++
T Consensus 328 ~~~L~~l~~~v~~~~t~A~~~r~~~~~~--g~l~~~v~~~~ 366 (372)
T 1r8g_A 328 SSAIEALHRQVVSGLNEAQLMRDFVADG--GSLIGLVKKHC 366 (372)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHTT--CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHCC--CCHHHHHHHHH
T ss_conf 8999999999984899999999999838--99999999999