HHsearch results for GI: 254781161 and protein with PDBid: 1va6_A

Probab=99.56  E-value=1.4e-11  Score=87.65  Aligned_cols=369  Identities=10%  Similarity=0.066  Sum_probs=196.4

Q ss_pred             HHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCC
Q ss_conf             2148999999998379872035586777653874765-784871122349999997555248864612784102334568
Q gi|254781161|r   10 IVTSIDDLVQHIASGIKPQEEFRIGTEHESFIFSRAD-HRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLS   88 (457)
Q Consensus        10 ~~~~~~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~-~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~   88 (457)
                      |+.++.+...++++...-=...+-|+|-|..=|+.++ ++..|             +...+|              ..+.
T Consensus         1 ~~~~~~~~l~~~~~~~~~l~~~~~GiEkE~lRv~~~G~ls~~~-------------HP~~lG--------------s~lt   53 (518)
T 1va6_A            1 MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTG-------------HPEALG--------------SALT   53 (518)
T ss_dssp             CCCCCHHHHHHHHHSGGGGTTCEEEEEEEEEEECTTSCBCCSC-------------SCGGGC--------------CTTT
T ss_pred             CCHHHHHHHHHHHHCHHHHHCCCCCEEEEHHEECCCCCCCCCC-------------CCHHHC--------------CCCC
T ss_conf             9635999999988699988438756251010278897836999-------------974338--------------7532


Q ss_pred             CCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHH----H--H
Q ss_conf             870341354-20242011010156778888887888787421038734210568788845420000013566----6--6
Q gi|254781161|r   89 KAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVL----M--K  161 (457)
Q Consensus        89 ~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~----m--~  161 (457)
                      ...||.+-. +|+|+.++|+.++.++...+......+..-+.   -..+....||..-..+. -+|...|..    +  .
T Consensus        54 hp~ItTDfsEs~lE~iTp~~~~~~~~~~~L~~lh~~~~~~l~---~E~lWp~SmP~~l~~~~-~I~ia~yg~sn~g~~k~  129 (518)
T 1va6_A           54 HKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMG---DERMWPLSMPSYIAEGQ-DIELAQYGTSNTGRFKT  129 (518)
T ss_dssp             CSSEEECSBTTEEEEECCCBSCHHHHHHHHHHHHHHHHTSST---TCEECCSSSCSSCCTTC-CCCBCCCCSSHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCCCCCCCC-CCCCEECCCCCCCHHHH
T ss_conf             779787566887773789999999999999999999995088---75326778898889746-77621168876307999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCCHH--------------H-----HHHHHHHHHHHHHHHHHHHCCCCCCCC---
Q ss_conf             654321126788876313404751478988--------------9-----999999998765678887437865588---
Q gi|254781161|r  162 KYMPQVGTHGLDMMFRTCTTQVSLDFSSEH--------------D-----MATKLRVSFKLQPLATAIFASSPFAEG---  219 (457)
Q Consensus       162 ~~~~~~g~~~~~mm~~tas~Qv~id~~~~~--------------d-----~~~~~n~a~~l~P~llAL~aNSPf~~G---  219 (457)
                      .|=...+.+.=.+|..+||+|+|+.+++.=              +     .....+-..++.++++.||-.||....   
T Consensus       130 ~YR~gL~~rYG~~mq~isGiHyNfS~~~~~~~~~~~~~~~~~~~~f~~~~Yl~l~rnf~r~~Wll~YLfGASP~~~~sf~  209 (518)
T 1va6_A          130 LYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAISSSFL  209 (518)
T ss_dssp             HHHHHHHHHHCHHHHTCCEEEEEEECCHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCBSEECGGGC
T ss_pred             HHHHHHHHHHCHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             99999998724134210203431457899999998613651178888899999999999997999998058855532245


Q ss_pred             --CCCCC---------------CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC--------EEECCCCCC
Q ss_conf             --77874---------------32268885202777886565445775419999999851453--------163058753
Q gi|254781161|r  220 --RINGF---------------QSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIPM--------YFILRKKEY  274 (457)
Q Consensus       220 --~~~g~---------------~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~~--------i~~~~~~~~  274 (457)
                        ++...               -|.|+--...+..    ......-+..+.+.|++-+...-.        |=...++.+
T Consensus       210 ~~~~~~~~~~~~~~~~~y~~~atSLRmS~~GY~n~----~q~~l~i~ynsL~~Yi~~l~~ai~~~~~~y~~ig~~~~g~~  285 (518)
T 1va6_A          210 QGKPTSLPFEKTESGMYYLPYATSLRLSDLGYTNK----SQSNLGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKR  285 (518)
T ss_dssp             ----CCSCCEECTTSCEECTTCSBGGGSTTSSCCG----GGTTSCCCSSCHHHHHHHHHHHHTCBCHHHHTTCSEETTEE
T ss_pred             CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC----CHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHH
T ss_conf             67875432220688774588864041477777884----23531644322399999999997598436888575778668


Q ss_pred             CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC------------------CCEEECCCCCCCH---HH
Q ss_conf             26678887885126432101365546677531123456643335------------------5012115788886---67
Q gi|254781161|r  275 YCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLR------------------NCLEMRGADSGRL---EN  333 (457)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~------------------~~IEiR~~Ds~P~---~~  333 (457)
                      .....        +.+-        .-.       -++..+|+|                  -|||+|.+|--|+   .-
T Consensus       286 ~qln~--------~~Lq--------iEn-------E~Ys~IRpKr~~~~ge~p~~aL~~~GIeYiEvR~lDlnPf~~~GI  342 (518)
T 1va6_A          286 LQINS--------NVLQ--------IEN-------ELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGV  342 (518)
T ss_dssp             CCSCS--------BSCS--------SGG-------GCCCSEEEECCCCTTCCHHHHHHHHCCCEEEEEEEECCTTSTTSC
T ss_pred             HHHHC--------CHHH--------HHH-------HHCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCC
T ss_conf             66420--------4322--------035-------531542555668888558999985587579887303887765587


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC--------CCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             5555888988765388544323202369999999999999763115866--------88308999999999999989852
Q gi|254781161|r  334 IFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTV--------RGQSLKDIAIQILTFAHQGLKNR  405 (457)
Q Consensus       334 ~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~--------~~~~~~~l~~~ll~~A~~GL~~r  405 (457)
                      ...-+.|+-.++  +..+-.....+.......+..|...++..|.+-.+        ...++.+|+.++++--..--...
T Consensus       343 s~~~i~FL~lfl--lycLl~~sp~~~~~E~~~i~~N~~~Vv~~GR~p~l~L~~~~~~~~i~lkd~a~eIL~eL~~iAe~L  420 (518)
T 1va6_A          343 DEQQVRFLDLFM--VWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLGIGCETAQFPLPQVGKDLFRDLKRVAQTL  420 (518)
T ss_dssp             CHHHHHHHHHHH--HHHHHSCCCCCCHHHHHHTHHHHHHHHHHTTCTTCEECSTTSCCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             889989999999--999807887678799999999999999836787741221799663569999999999999999997


Q ss_pred             CCCCCCCCCHHHHHHHHHHHH---H-CCCCCHHHHHHHHHH
Q ss_conf             312455645889999999999---8-389858999998710
Q gi|254781161|r  406 SAKNHLQEDETIFLKPLEKII---H-NNQTTADEMLAAYHT  442 (457)
Q Consensus       406 ~~~~~~~~dE~~yL~~l~~~i---~-~g~t~A~~~l~~y~~  442 (457)
                      +.   ... ...|.+.|....   + ...||+.++++.-+.
T Consensus       421 D~---~~~-~~~Y~~aL~~~~~kl~dP~lTpSarlL~em~e  457 (518)
T 1va6_A          421 DS---ING-GEAYQKVCDELVACFDNPDLTFSARILRSMID  457 (518)
T ss_dssp             HH---HHC-SSHHHHHHHHHHTTTTCGGGSHHHHHHHHHHH
T ss_pred             HH---CCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             41---448-67999999999998629788967999999996