RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254781161|ref|YP_003065574.1| glutamate--cysteine ligase
[Candidatus Liberibacter asiaticus str. psy62]
         (457 letters)



>gnl|CDD|33374 COG3572, GshA, Gamma-glutamylcysteine synthetase [Coenzyme
           metabolism].
          Length = 456

 Score =  532 bits (1372), Expect = e-152
 Identities = 231/457 (50%), Positives = 303/457 (66%), Gaps = 1/457 (0%)

Query: 1   MTCNPLANTIVTSIDDLVQHIASGIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVT 60
           M  +    T +TS+ +L  ++A G K + ++RIGTEHE F F      P+PY+GE  I  
Sbjct: 1   MARDTTTETPLTSVAELTDYLAKGDKEKTDWRIGTEHEKFGFYLDGLSPVPYEGEAGIFA 60

Query: 61  ILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPGGQLELSTTTLQNVHQIKGEILGY 120
           +L  +Q+ L W+ IMD GNIIGL  P+ +  IS+EPGGQ ELS   L+ +HQ  GE+  +
Sbjct: 61  LLDGMQR-LGWEPIMDVGNIIGLVEPIGQGAISLEPGGQFELSGAPLETIHQTCGEMNQH 119

Query: 121 IQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCT 180
           + +L+EI   L LG +G+G +PKW   E+P+MPKSRY +M +YMP+VG  GLDMM RTCT
Sbjct: 120 LAVLREIAAELGLGFVGLGGSPKWTRAEVPVMPKSRYAIMTRYMPKVGVKGLDMMTRTCT 179

Query: 181 TQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRT 240
            QV+LDFSSE DM  K+RVS  LQPLATA+FA+SPF EG+ NG  SWR +IWR TD  R+
Sbjct: 180 IQVNLDFSSETDMRRKMRVSLALQPLATALFANSPFTEGKPNGLLSWRGDIWRDTDPQRS 239

Query: 241 EILPFILRDNSNFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPT 300
            +LPF   D+  F  Y  +ALD+PMYF+ R   Y+ C  ++FRQFM GALKG +    PT
Sbjct: 240 GVLPFAFSDDFGFIDYVNYALDVPMYFVRRTGHYHDCAHVSFRQFMAGALKGELPGRRPT 299

Query: 301 LEDWENHLSTLFPAVRLRNCLEMRGADSGRLENIFAVAAFWTGILYDSSALQNADHLTSS 360
           ++DW NHLSTLFP VRL+  LEMRGADSG    I A+ AFW G+LYD  AL  A+ LT  
Sbjct: 300 MKDWTNHLSTLFPDVRLKRFLEMRGADSGPWRRICALPAFWVGLLYDPEALDAAEDLTKD 359

Query: 361 WSFYDINKLNNTVPSKGMRSTVRGQSLKDIAIQILTFAHQGLKNRSAKNHLQEDETIFLK 420
           W++ ++  L N VP KG+ +   G +L +IA  +L  +  GLKNR   N    DETIFL 
Sbjct: 360 WTYEEVLALRNAVPKKGLAAEFAGNTLLEIAKDVLPISRIGLKNRLVLNGDGGDETIFLD 419

Query: 421 PLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEYAY 457
           PL++++    T A+ ML+ YH  WG SI+P F EYAY
Sbjct: 420 PLDEVLAGGTTIAEAMLSLYHGAWGGSIEPVFNEYAY 456


>gnl|CDD|146638 pfam04107, GCS2, Glutamate-cysteine ligase family 2(GCS2).  Also
           known as gamma-glutamylcysteine synthetase and gamma-ECS
           (EC:6.3.2.2). This enzyme catalyses the first and rate
           limiting step in de novo glutathione biosynthesis.
           Members of this family are found in archaea, bacteria
           and plants. May and Leaver discuss the possible
           evolutionary origins of glutamate-cysteine ligase
           enzymes in different organisms and suggest that it
           evolved independently in different eukaryotes, from an
           ancestral bacterial enzyme. They also state that
           Arabidopsis thaliana gamma-glutamylcysteine synthetase
           is structurally unrelated to mammalian, yeast and
           Escherichia coli homologues. In plants, there are
           separate cytosolic and chloroplast forms of the enzyme.
          Length = 291

 Score =  223 bits (569), Expect = 1e-58
 Identities = 105/307 (34%), Positives = 151/307 (49%), Gaps = 24/307 (7%)

Query: 48  RPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPGGQLELSTTTL 107
           R L  + E  +V +L        W  I++    IGL   L    +   PGGQ+ELST  L
Sbjct: 1   RTLGVEEEFGVVDLLGGDL--RGWSPILEDEAKIGL--SLGGGFVKELPGGQVELSTPPL 56

Query: 108 QNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQV 167
           +++ +   EI  + + L+ +   L LG+LG+G +P       P+MPK RY  M +YMP+V
Sbjct: 57  ESLAEAAEEISQHREELRHVADELGLGLLGLGTHPFALRSRDPVMPKGRYRRMYEYMPRV 116

Query: 168 GTHGLDMMFRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSW 227
           G +G  MM   C  QV++D SSE  MA  LR+   L P+  A+ A+SPF  GR  G+ S 
Sbjct: 117 GVYGRQMMVAGCHVQVNIDSSSEAIMA-VLRLVRALLPVLLALSANSPFWGGRDTGYAST 175

Query: 228 RSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMN 287
           R+ I+  T + +   LP    D + FE YA++ALD  + F+ R         + +     
Sbjct: 176 RALIF--TQTPQAGPLPLAFEDGA-FERYARYALDTGIIFVRR--------RLWWD---- 220

Query: 288 GALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGRLENIFAVAAFWTGILYD 347
               GR         +   H +T FP VRLR  LE R  D+     + A+ A WT  L D
Sbjct: 221 ----GRPPGLPGETLELRIHDTTAFPPVRLRALLEARLLDAQPDWRLDALPAAWTVALLD 276

Query: 348 SSALQNA 354
             A +NA
Sbjct: 277 DEAEENA 283


>gnl|CDD|32353 COG2170, COG2170, Uncharacterized conserved protein [Function
           unknown].
          Length = 369

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 11/161 (6%)

Query: 99  QLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYV 158
            +EL+T   + + +   ++      L +   +  L I G G +P        +    RY 
Sbjct: 49  TVELATGVCRLLAEAAAQLRALRDYLVQAASDHGLRICGGGTHPFADWRRQEVPDNPRY- 107

Query: 159 LMKKYMPQVGTHGLDMMFRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAE 218
             ++ + + G  G  M        V +   S  D    L    +  P   A+ ASSPF +
Sbjct: 108 --QRLIERTGYLGRQMT--VAGQHVHVGIPSPDDAMYLLHRLLRYVPHLLALSASSPFWQ 163

Query: 219 GRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQW 259
           G   G+ S R+ I+       T  LP       ++  +  +
Sbjct: 164 GTDTGYASARANIFSQLP---TNGLPPAF---QSWAAFEAF 198


>gnl|CDD|147656 pfam05603, DUF775, Protein of unknown function (DUF775).  This
           family consists of several eukaryotic proteins of
           unknown function.
          Length = 195

 Score = 27.7 bits (62), Expect = 6.8
 Identities = 20/76 (26%), Positives = 26/76 (34%), Gaps = 2/76 (2%)

Query: 68  KLAWKEIMDKGNIIGLANPLSKA--GISIEPGGQLELSTTTLQNVHQIKGEILGYIQILK 125
           K++    M         NP S A  GISIEP  QL      L+              +  
Sbjct: 80  KVSNDIDMLDDGNPATGNPQSTAQIGISIEPLDQLAQQLAALKQSQSGSQAAQQNAGVTP 139

Query: 126 EITQNLDLGILGMGFN 141
             T+ L   I+   FN
Sbjct: 140 VSTKQLAQKIVENLFN 155


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.321    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0728    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 5,674,375
Number of extensions: 297940
Number of successful extensions: 561
Number of sequences better than 10.0: 1
Number of HSP's gapped: 557
Number of HSP's successfully gapped: 8
Length of query: 457
Length of database: 6,263,737
Length adjustment: 97
Effective length of query: 360
Effective length of database: 4,167,664
Effective search space: 1500359040
Effective search space used: 1500359040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (26.5 bits)